Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan5g0191 | ATGGGAAGACAACCTTGTTGTGATAAGGTTGGTGTTAAGAGAGGTCCATGGACAATTGAGGAAGATCACAAGCTTATGAATTTCATCCTCAACAATGGTATCCATTGTTGGAGAACAGTTCCCAAACTTTCAGGTTTACTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATTAATTATTTGAGGCCAGATCTTAAGAGAGGTGGCTTTACTGAAATGGAAGAGGATCAAATTATACAACTACATTCACTTCTTGGTAACAGATGGTCTAAGATTGCAACACATTTTCCTGGAAGAACAGACAACGAAATCAAGAACCACTGGAACACAAGAATTAAGAAGAGGTTGAAGCTCCTTGGTCTAGACCCTATGACCAAGAAGCCAATTGAGCAAATGGAACATTTTGATAATGGTGAAAAAAATAAGACATACCCACATCCAAATACTTCAAAAGGGTCAGAAGAAAATATAGAGATCAAGTCCTTGGACAATAATGGGACCAAAGATATGCCAAAAACAGAAGGGAAAATAGAAGAAAACAAGGTTACATGGGATGTTGAACTTCACAACTATGAAAACCAATGTTCCCAAGTTGAAATGGGATCATGGATAAGCCAAGAAAATAACACAAGTGCTAGCTCTTATTGTAGTTCTTCTTTCTCTCTTGATGAATCTAGTTACCCTTCTGTGGGTCAATCCCCTTATTTTCAAGGAGATTCCTTACAACAATGGGTTGATAATATGGATTCCATTCTCTCATGGGATAACTTCAATCCACTTGAAGATGATTTTCTCTTCTTGGAAAATAAGCAATAA | 816 | 0.3713 | MGRQPCCDKVGVKRGPWTIEEDHKLMNFILNNGIHCWRTVPKLSGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSLLGNRWSKIATHFPGRTDNEIKNHWNTRIKKRLKLLGLDPMTKKPIEQMEHFDNGEKNKTYPHPNTSKGSEENIEIKSLDNNGTKDMPKTEGKIEENKVTWDVELHNYENQCSQVEMGSWISQENNTSASSYCSSSFSLDESSYPSVGQSPYFQGDSLQQWVDNMDSILSWDNFNPLEDDFLFLENKQ* | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan5g0191 | 271 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Lan5g0191 | 271 | Gene3D | - | 12 | 67 | - | - | |
Lan5g0191 | 271 | SMART | sant | 66 | 114 | IPR001005 | - | |
Lan5g0191 | 271 | SMART | sant | 13 | 63 | IPR001005 | - | |
Lan5g0191 | 271 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Lan5g0191 | 271 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Lan5g0191 | 271 | PANTHER | MYB DOMAIN PROTEIN 40 | 2 | 249 | - | - | |
Lan5g0191 | 271 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Lan5g0191 | 271 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Lan5g0191 | 271 | MobiDBLite | consensus disorder prediction | 134 | 154 | - | - | |
Lan5g0191 | 271 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 2 | 249 | - | - | |
Lan5g0191 | 271 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Lan5g0191 | 271 | CDD | SANT | 70 | 110 | IPR001005 | - | |
Lan5g0191 | 271 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Lan5g0191 | 271 | Pfam | Myb-like DNA-binding domain | 67 | 110 | IPR001005 | - | |
Lan5g0191 | 271 | Gene3D | - | 69 | 143 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan5g0191 | Lan-Chr5 | 2306301 | 2307798 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan5g0191 | 1 | 160 | MYB Transcription Factor Family | AT5G16600 | 65.000 | 2.34e-74 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lan5g0191 | Myb_DNA-binding | 2.6e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan5g0191 | K09422 | - | gmx:100819471 | 434.876 |