Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0190 TATGCCATTTTCACCATAAACTCTCTTGCACTCATAGTTTCCAACAATATGGCTTCTTCTTGCTCCTCCATGTTCTTCCTATTTGTGCTTCTCTTGGCCATTTTCATTGGTCTTCAACGTTTCTATGTGGCTTCTTTTGAGTTCCAAGTTGGTGGCACAAAAGGGTGGATTGTTCCACCTCCTAATGACACAAACACCTATAATGATTGGGCTTCCAATAATAGGTTCCAAGTTGGTGACACTATTCATTTTAGTTACAAAAAGGACTCAGTGATGGAGGTGAGTGAGGAAGATTACAAGGACTGCAATGCAACACACCCAACATTCTTCTCCAACATTGGTAACACTGTGTTCATATTGAACCACTCAGGGACATTCTACTTCATAAGTGGTGCATCAGGGCACTGTGATAAGGGACAGAAGATGATTGTTAGGGTCATGGTTCAAGATGAATCTCTTCCTCATCATGCAAAGTCCTTTGGGTACCATGATGCTGTTTCACCAATTAGGATCTTTGGAATGGTTTTGTTTCAATTTGTTTTGGAATATGTTGTTTCCTATGTCATTTAA 570 0.4 YAIFTINSLALIVSNNMASSCSSMFFLFVLLLAIFIGLQRFYVASFEFQVGGTKGWIVPPPNDTNTYNDWASNNRFQVGDTIHFSYKKDSVMEVSEEDYKDCNATHPTFFSNIGNTVFILNHSGTFYFISGASGHCDKGQKMIVRVMVQDESLPHHAKSFGYHDAVSPIRIFGMVLFQFVLEYVVSYVI* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0190 189 Gene3D - 45 152 IPR008972 -
Lan5g0190 189 Pfam Plastocyanin-like domain 65 140 IPR003245 GO:0009055
Lan5g0190 189 PANTHER BLUE COPPER PROTEIN 26 150 IPR039391 GO:0009055
Lan5g0190 189 SUPERFAMILY Cupredoxins 46 147 IPR008972 -
Lan5g0190 189 CDD OsENODL1_like 46 147 IPR041846 -
Lan5g0190 189 ProSiteProfiles Phytocyanin domain profile. 46 148 IPR003245 GO:0009055
Lan5g0190 189 PANTHER EARLY NODULIN-LIKE PROTEIN 21 26 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0190 Lan-Chr5 2295797 2296949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0190 24 152 Phytocyanin Superfamily AT5G14345 52.713 2.89e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0190 - - lang:109346935 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0190 5 2295797 2296949 Lan20g1397 20 20679059 20680362 LSH