Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0172 ATGCGTATGAGTTGTAACGGATGCAGGGTGTTACGAAAAGGTTGTAGTGAAGATTGTAGCATCAGACCATGTTTGCAATGGATCAAGAAACCAGAGTCACAAGCTAATGCTACTGTTTTTCTTGCTAAGTTTTATGGTCGTGCTGGTCTCATCAACCTCATCAACGCTGGACCTCAAAACCTTCGTCCAGCGATTTTTCGATCTTTGCTATATGAGGCATGTGGCCGAATAGTGAACCCGATTTATGGATCTGTTGGTCTATTATGGTCTGGTAGCTGGCAGCTTTGTCAAGCCGCCGTTGAAGCCGTTTTGAATGGTGAGCCGATCACGCCGATAACTTCAGAGGCGGCTTCAAACGGGAGGGGCCCACCTCTCAAGCCCTACGACATACGCCACGTGTCGAAAGAAGTTCAAGCAGTCAAGTCCCGGACCCGGTTCAAACGGACCGGAGGAGGAGATGGGGTGAAGCCGGATGTTGACAATGTATCCCGGTTCGGTCCAGTTGAACCGGAATCTGAAGAGGTGGTCAACCGGTCTGCGAGTCATGAGTCAGCGCTGAGCCACCAGTCTGAGGTTGCGGCCGCGGCTGAAGGAGAGAGCAAATATAGTGATAGTGCGGTGTCGGCGGAGACGTCGGTTTTATTTCATGATGAACCGGAGTCAGACCGTAAATTGGATTGGAATTGA 687 0.5051 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKKPESQANATVFLAKFYGRAGLINLINAGPQNLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLNGEPITPITSEAASNGRGPPLKPYDIRHVSKEVQAVKSRTRFKRTGGGDGVKPDVDNVSRFGPVEPESEEVVNRSASHESALSHQSEVAAAAEGESKYSDSAVSAETSVLFHDEPESDRKLDWN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0172 228 MobiDBLite consensus disorder prediction 144 228 - -
Lan5g0172 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 222 - -
Lan5g0172 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 222 - -
Lan5g0172 228 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lan5g0172 228 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0172 Lan-Chr5 2083718 2085091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0172 1 208 AS2 family AT3G02550 66.986 1.32e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan5g0172 LOB 8.6e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0172 5 2083718 2085091 Lan5g0172 5 2083718 2085091 ECH