Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0169 ATGGCTGCACCCATTGTGAAGAAGAAGGTTGTGTTCATAATGGGATCAACTGGCACTGGAAAAACCAAACTTTCAATCAACCTAGGTTCCCAATTCCCATCTGAGATCATAAATTCTGACAAAATTCAAGTATACAAGGGCCTAGATATATTGGTGAATAAGATACCTGAGTCTGAACGTTGTGGCATTCCCCATCACTTGCTAGATATCATTGATAATCATTACTACACCTTCACTTCTGATGACTTTTGCAAACATGCACTTGCTGCTATAGATCTCATTCATCAAAATGGACACTTACCCATTATTGTGGGAGGATCCAATAATTACCTAGAAGCCTTAGTGGAGGACCCTAACAATGCATTTCTTTCCAAATATGATTCTTGTTTTATTTGGCTTCATGTGTCTTTGCCTGTTTTATTTCAATATTTAGACAAAAGGGTTGATGAAATGGTGGATGCAGGGATTTTGGATGAGATCCGACAAGTTTATGTTCCTGGAGCAAGTTACTCTCATGGTTTGAGAAGAGCCATTGGGGTTGAAGAGTTTGATCATTATATTCTTATAGAGGAAGAATCATATGATGAGGCTTATAAGGAAAAGGTGCTACAAGATGCAATTAGGAGAACAAAAGAAAATACTTTTAAGTTGGCTGAAGATCAACTTCAGAAGATTCATAGGCTTAACTATGAGCTTGGATGGGGAATGCACATGATTGATTCTACACTAGTGTTTGAAACTGTTTTAAGAGGAGAAAAGTATATGGATTTGTACCAAGAGATTATATTGAAACCGAGCATGAATATAGTGCAAAAGTTTCTAGAGGAGGCAACCCAAGAAACACCATAA 849 0.3734 MAAPIVKKKVVFIMGSTGTGKTKLSINLGSQFPSEIINSDKIQVYKGLDILVNKIPESERCGIPHHLLDIIDNHYYTFTSDDFCKHALAAIDLIHQNGHLPIIVGGSNNYLEALVEDPNNAFLSKYDSCFIWLHVSLPVLFQYLDKRVDEMVDAGILDEIRQVYVPGASYSHGLRRAIGVEEFDHYILIEEESYDEAYKEKVLQDAIRRTKENTFKLAEDQLQKIHRLNYELGWGMHMIDSTLVFETVLRGEKYMDLYQEIILKPSMNIVQKFLEEATQETP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0169 282 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 236 - -
Lan5g0169 282 Gene3D - 7 274 IPR027417 -
Lan5g0169 282 Pfam IPP transferase 43 117 - -
Lan5g0169 282 Pfam IPP transferase 124 223 - -
Lan5g0169 282 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5 280 - -
Lan5g0169 282 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 280 IPR039657 -
Lan5g0169 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 183 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0169 Lan-Chr5 2058178 2059533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0169 124 279 C2H2 Transcription Factor Family AT2G27760 34.066 2.88e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0169 K10760 - gmx:121173984 408.297