Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0159 ATGGCGTCTCCACCGGTGGTTCGGTTTCCGATCGTAGCGACGGTGAGAGTGGTTGGTGTTGTCATCACTGTTCTTCTTCTCACTTGGATACTCCATTTCAGGGGTGGCATGGCTCTTGTTTCTGATAACAAAATTCTCATCTTTAATGTCCATCCAGTGTTGATGGTGATTGGACTTGTTCTACTTAATGGTGAAGGGATGCTTGCATATAAGACAATACCTGGAACCAAAAACTTCAAAAAAACTGTTCATCTCACATTACAGTTTCTTACACTCATTCTAAGCATAATTGGTGTCTGGGCTGCATGGAAGTTTCATGTTGAAAGGGGCATTGACAATTTCTACAGCCTGCATTCATGGTTGGGTCTTGCTGGCCTTTTCCTCTTCTCCATCCAGTGGGGTGCTGGCTTCACAACATTTTGGTATCCAGGAGGCTCAAGAAATAGTAGAGCTTCTCTATTGCCATGGCATGTGTTCTTTGGGATCTTTATTTATGCCTTGGCTATAGCTACAACTGTTACTGGTTTTCTAGAGAAGGCTACATTCCTTCAAAGCAGCAAGATCATTTCGCGCTATTCCAACGAAGCTCTGCTGATCAATTCGTTGGGCATTCTGACTGTCGTTTTAGGTGGCCTTGTCGTTCTTGGACTCGTTACGCCATCGAATGCGATTGCCAAGGCAGATGCCATAAGGGGAAATGAGTAA 705 0.444 MASPPVVRFPIVATVRVVGVVITVLLLTWILHFRGGMALVSDNKILIFNVHPVLMVIGLVLLNGEGMLAYKTIPGTKNFKKTVHLTLQFLTLILSIIGVWAAWKFHVERGIDNFYSLHSWLGLAGLFLFSIQWGAGFTTFWYPGGSRNSRASLLPWHVFFGIFIYALAIATTVTGFLEKATFLQSSKIISRYSNEALLINSLGILTVVLGGLVVLGLVTPSNAIAKADAIRGNE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0159 234 Gene3D - 1 229 - -
Lan5g0159 234 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Lan5g0159 234 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Lan5g0159 234 SMART 561_7 50 176 IPR006593 -
Lan5g0159 234 CDD Cyt_b561_ACYB-1_like 41 184 - -
Lan5g0159 234 PANTHER CYTOCHROME B561-RELATED 5 232 IPR043205 GO:0016491
Lan5g0159 234 PANTHER B561, PUTATIVE-RELATED 5 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0159 Lan-Chr5 1952209 1955172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0159 1 220 Chloroplast and Mitochondria Gene Families AT5G38630 67.273 1.21e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0159 K08360 - gmx:100787570 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0159 5 1952209 1955172 Lan5g0159 5 1952209 1955172 ECH