Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0153 ATGCAAGCCCCAGAAATTGCAGGACTTAATTACACACTCCATTCTCCATACACCACAATTCATAACAACAACATTCCATCATTTCAACTTCAAACATTCCCTAACCAATTCTATGGCTTCAACAACAACAACAACAACACTTTCCACATTCCTGATCACTTTAGTCCACAATCATCAGGTATAAGCAGCAACTCCACTTCTGATGAAGCAGATGAACAAAACCTTAGGAAACATAGAAGAATGATATCAAATAGAGAATCTGCAAGAAGATCAAGGATGAGGAAGAAAAAACACATTGATGAGCTTTGGTCACAAGTCATGTGGCTCAGGAATATGAATCACAAGCTATTAGAAAAGGTGAACCATGTGTTAGAGTGCTATGATCATGCAGTTCAAGAAAATGCTAAGCTGAAAGAACAAACTTCAGAACTTCACCAAATCATAAGGGACATGCAGATGCATAGTCCATGCCATTCTTTTGGACCCTTGGAAGATGTTCCTTGTAACTCAACATATCTAAGATATGATTCCTCAAACCAAAACATGTCAAATTCTATGGATTTTCTTGGTTAG 573 0.3752 MQAPEIAGLNYTLHSPYTTIHNNNIPSFQLQTFPNQFYGFNNNNNNTFHIPDHFSPQSSGISSNSTSDEADEQNLRKHRRMISNRESARRSRMRKKKHIDELWSQVMWLRNMNHKLLEKVNHVLECYDHAVQENAKLKEQTSELHQIIRDMQMHSPCHSFGPLEDVPCNSTYLRYDSSNQNMSNSMDFLG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0153 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 123 IPR004827 GO:0003700|GO:0006355
Lan5g0153 190 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 189 IPR044521 -
Lan5g0153 190 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Lan5g0153 190 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Lan5g0153 190 MobiDBLite consensus disorder prediction 50 93 - -
Lan5g0153 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lan5g0153 190 Gene3D - 75 131 - -
Lan5g0153 190 Pfam bZIP transcription factor 72 123 IPR004827 GO:0003700|GO:0006355
Lan5g0153 190 MobiDBLite consensus disorder prediction 50 69 - -
Lan5g0153 190 PANTHER BZIP TRANSCRIPTION FACTOR 1 189 - -
Lan5g0153 190 SUPERFAMILY Leucine zipper domain 76 125 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0153 Lan-Chr5 1901897 1902612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0153 10 160 bZIP Transcription Factor Family AT3G30530 51.572 4.07e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan5g0153 bZIP_1 2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0153 - - lang:109335342 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0153 5 1901897 1902612 Lan8g0942 8 11151697 11152509 LSH
Lan5g0153 5 1901897 1902612 Lan20g1464 20 21352918 21356203 LSH
Lan5g0153 5 1901897 1902612 Lan8g0145 8 2432312 2433360 PCT
Lan8g0145 8 2432312 2433360 Lan5g0153 5 1901897 1902612 PCT