Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0150 ATGGTTCGTCAAGCTGATTTAGTTATCATCGGTGTCACTGTTGGTTTGGCCCTTGGAATTCTGATTTCTTTCCTCATATTTTTCGGCATAAGGTGGTATAAGAAACGGGCTAATATTAGGCGATCTGCAAATGAGAATAGCTTGACAACTCTTCCGATAAGAACAAATGGATTGGAAACAAGCACCGACTTCAGTGCATCTATTACTAGTTCCATGGGCATGTCTGTATCAGAAAATGTACACAAAAACTCTCCTTTTAGTTGGTGGAGTCAGCAAAGCAAAGATCGGTTTGCTTCACCCTCGGGCATTCCTAAGTACTCATACAAAGAAATTCAAAAGGCCACACAAAATTTCACGACGACATTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTGCAGGAGAGGTGGTAGCTGTGAAGGTGCTTGCACCCAATTCCAAACAAGGGGAGAAAGAATTCCAAACGGAGGTGCTTCTGCTAGGAAGACTGCATCATCGCAATCTCGTGAATTTGGTTGGATATTGTGTAGATAAAGGACAACACATACTGGTTTATCAGTTCATGAGTAATGGAAGTTTAGCAAATCTTCTATATGGTGAAGAAAAGAAATTGAGTTGGGATGAAAGGCTGCAAATCGCCCTCGATATTTCACATGGGATAGAATACCTTCATGAAGGAGCTGTCCCACCAGTCATACATCGCGATTTGAAGTCTGCCAACATATTGCTAGATCACTTGATGCGAGCTAAGGTTGCTGATTTTGGCCTCTCAAAGGAAGAGGTCTTTGATGGCCGTAATTCTGGCCTTAAAGGTACATACGGCTACATGGATCCGGCATACATTTCCACAAGCAAGTTTACAACGAAGAGTGACGTCTACAGTTTCGGTATCATAATCTTTGAGCTCATCACTGCCATCCACCCACATCAAAATCTGTTGGAATACATTAGCCTTGCTGCTATGGATCATGATGGCATAGATGGCATTGTTGACAAGCAAATTGTGGAAAACTGCAACATTGAAGAAGTGAGGCAACTTGCTAAAATTGCACACAAGTGTTTGCACAAATCACCGAGGAAACGACCTTCAATAGGCGAGGTTTCACAGAGTATATCGTGGATAAAGCAAAGGCGGCAGCGCCATGCGATAGGACAGAACATGTCGTATGCGAGCGATGACTTTTCCAGAGCTGTGAGTCGATTAGAAGATCGGCATGTTGAATTGAGCAGGATAGCCACTATGGACATCAAAGAAAATGGATGA 1275 0.429 MVRQADLVIIGVTVGLALGILISFLIFFGIRWYKKRANIRRSANENSLTTLPIRTNGLETSTDFSASITSSMGMSVSENVHKNSPFSWWSQQSKDRFASPSGIPKYSYKEIQKATQNFTTTLGQGSFGTVYKATMPAGEVVAVKVLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQHILVYQFMSNGSLANLLYGEEKKLSWDERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHLMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYISTSKFTTKSDVYSFGIIIFELITAIHPHQNLLEYISLAAMDHDGIDGIVDKQIVENCNIEEVRQLAKIAHKCLHKSPRKRPSIGEVSQSISWIKQRRQRHAIGQNMSYASDDFSRAVSRLEDRHVELSRIATMDIKENG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0150 424 ProSiteProfiles Protein kinase domain profile. 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0150 424 PANTHER OS01G0750732 PROTEIN 9 418 - -
Lan5g0150 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Lan5g0150 424 CDD STKc_IRAK 122 373 - -
Lan5g0150 424 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Lan5g0150 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 418 - -
Lan5g0150 424 SUPERFAMILY Protein kinase-like (PK-like) 94 380 IPR011009 -
Lan5g0150 424 Gene3D Phosphorylase Kinase; domain 1 80 191 - -
Lan5g0150 424 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lan5g0150 424 Gene3D Transferase(Phosphotransferase) domain 1 192 400 - -
Lan5g0150 424 SMART serkin_6 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0150 Lan-Chr5 1863478 1867881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0150 85 380 Receptor kinase-like Gene Family AT1G79620 43.087 3.29e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan5g0150 PK_Tyr_Ser-Thr 5.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0150 - - gmx:100819995 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0150 5 1863478 1867881 Lan5g0150 5 1863478 1867881 ECH