Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0148 ATGGCTAATGCTTTTGTTGCACCACCACCACCATTGAAAGATGAGCTTGATATTGTGATACCTACAATAAGGAACCTTGATTTTCTTGAAATGTGGAGGCCATTTTTTGAGCCTTATCATTTGATTATTGTTCAAGATGGTGACCCATCAAAAACTATTAAGGTTCCTTCTGGTTTTGATTATGAGCTTTATAACCGTAATGATATCAACAAGATTCTTGGTCCTAGGTCATCTTGTATCTCATTCAAGGATTCTGCTTGTCGTTGCTTTGGTTACATGGTGTCTAAGAAGAAATATATCTTCACCATTGATGATGATTGCTTTGTGGCTAATGATCCATCTGGAAAAGCTGTTAATGCACTTCAGCAACATATTAAGAACCTTCTATGTCCATCAACTCCATTGTTTTTCAATACTCTCTATGACCCTTTCAGAGAAGGTGCAGATTTTGTTCGTGGCTACCCTTTTAGTCTTCGTGAAGGTGTACCCACTGCTATTTCTCATGGACTCTGGCTCAATATCCCTGACTATGATGCTCCTACACAGCTTGTCAAGCCTCTTGAAAGGAACACGAGGTATGTGGATACTGTTCTTACTATTCCCAAAGGAACATTGTTTCCTATGTGTGGAATGAATTTGGCATTCGATCGTGATCTTATTGGACCAGCAATGTACTTTGGTCTCATGGGAGATGGTCAACCAATTGGTCGCTATGATGACATGTGGGCTGGCTGGTGCTGCAAGGTTATCTGTGACCACTTGGGGCTAGGAATCAAGACTGGTTTACCTTATATCTATCACAGTAAGGCAAGTAACCCATTTGTGAACCTTAGGAAAGAGTACAAAGGCATATTCTGGCAGGAAGATATTATTCCATTCTTTCAAAGCCTTACTCTTCCAAAAGAAGCCACTACTGTTCAAAAGTGCTATATTGAACTTTCCAAACAAGTTAAGGAAAAACTCTCAAAGATAGATCCTTACTTTGACAAGCTTGCAGATGCTATGGTTACTTGGATTGAAGCTTGGGATGAACTTAACCCACAAGGACCATCTCAGGCCAATGGCAAAGCATAA 1074 0.4004 MANAFVAPPPPLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPSGFDYELYNRNDINKILGPRSSCISFKDSACRCFGYMVSKKKYIFTIDDDCFVANDPSGKAVNALQQHIKNLLCPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAISHGLWLNIPDYDAPTQLVKPLERNTRYVDTVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSLTLPKEATTVQKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDELNPQGPSQANGKA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0148 357 PANTHER UDP-ARABINOSE MUTASE 7 352 IPR037595 -
Lan5g0148 357 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 7 352 - -
Lan5g0148 357 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Lan5g0148 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 35 246 IPR029044 -
Lan5g0148 357 Pfam Reversibly glycosylated polypeptide 13 346 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0148 Lan-Chr5 1852140 1855347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0148 K13379 - gmx:100778357 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0148 5 1852140 1855347 Lan1g1069 1 20857701 20859807 ECH
Lan5g0148 5 1852140 1855347 Lan5g0148 5 1852140 1855347 ECH
Lan11g0782 11 7289785 7293023 Lan5g0148 5 1852140 1855347 ECH