Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0104 ATGGCAGCTTCACCTTCTGTATTAACTGTCTCACAGGACGGAACTGGACACTACAAAACAGTGCAAGAAGCTATCAACGCCGTGCCACTCGGAAACACTCGCCGGACCATCATTCGGGTGTCGCCCGGAACCTATAAGCAGCCACTTTACGTGGCCAAGACAAAGAACTTCATCACCCTTTCTGGTGTGTGTTCTGAGGACACTGTTCTTACTTGGAACAATACAGCTACCAAAATCAAACACCACCAAGGTGATAAGGTGATAGGAACTGGGACGTTTGGTTGTGGCAGTGTTATTGTGGAAGGGAGTGACTTTATTGCTGAGAATATTACCTTTGAGAATTCTTCTCCTGAGGGCTCTGGGCAAGCAGTGGCACTTAGAGTAACAGCTGATCGATGTGCTTTCTACAATTGCAGGTTCCTTGGATGGCAAGACACAGTTTACTTACATTATGGTAAACAGTACTTCAAAGATTGTTATATTGAAGGAAGTGTAGACTTCATTTTTGGTAATAGCACTGCACTTTTGGAGCATTGTCATATCCATTGTAAGTCTGCAGGGTTCATAACTGCACATAGCAGAAAATCTCAACAAGAAACAACAGCTTATGTTTTCCTAAGATGTGTTATCACAGGTAATGGAGGAAGTTCATATTCATATCTTGGAAGACCATGGGGATCTTTTGGAAGAGTGGTATTTGCATTCACTTATATTGATCAATGCATAAAACTTGTTGGTTGGAATAATTGGGGGAAAACTGAGAATGAGAAGAGTGCATGCTTTTATGAATATAGGTGCTATGGACCTGGTTGGTGCCCATCAAAAAGAGTTGTATGGGCAAGAGAATTGGTGTATAAAGAAGCAGAACAGTTCCTAATGCATCGCTTCATTGATCCAGAACCACAAAGACCTTGGCTTGCTCAAAAAATGGCATTGAGGATTCCATATTCTGCTTAG 957 0.4211 MAASPSVLTVSQDGTGHYKTVQEAINAVPLGNTRRTIIRVSPGTYKQPLYVAKTKNFITLSGVCSEDTVLTWNNTATKIKHHQGDKVIGTGTFGCGSVIVEGSDFIAENITFENSSPEGSGQAVALRVTADRCAFYNCRFLGWQDTVYLHYGKQYFKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAHSRKSQQETTAYVFLRCVITGNGGSSYSYLGRPWGSFGRVVFAFTYIDQCIKLVGWNNWGKTENEKSACFYEYRCYGPGWCPSKRVVWARELVYKEAEQFLMHRFIDPEPQRPWLAQKMALRIPYSA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0104 318 Gene3D - 4 312 IPR012334 -
Lan5g0104 318 PANTHER PECTINESTERASE 5 317 - -
Lan5g0104 318 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 317 - -
Lan5g0104 318 Pfam Pectinesterase 9 298 IPR000070 GO:0030599|GO:0042545
Lan5g0104 318 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Lan5g0104 318 SUPERFAMILY Pectin lyase-like 2 305 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0104 Lan-Chr5 1268253 1270925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0104 7 311 Carbohydrate Esterase AT5G47500 36.422 9.27e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0104 K01051 - tcc:18601567 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0104 5 1268253 1270925 Lan5g0104 5 1268253 1270925 ECH