Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0102 ATGGGAAGATCACCATGTTGTGACAAGGTAGGGTTAAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTCTTAGCTTATATTGAAGAACATGGCCATGGATGTTGGCGTGCTTTGCCATCAAAAGCCGGACTTCAAAGGTGTGGCAAGAGTTGTAGACTGAGATGGACCAATTATCTTAGGCCTGATATTAAGAGAGGAAAGTTTAGTTTGCAAGAAGAACAAACCATTATTCAACTCCATGCTCTCTTAGGAAACAGGTGGTCAGCAATAGCCACACACTTGCCAAAAAGAACAGATAATGAGATCAAAAACTACTGGAATACACATCTAAAGAAACGACTAACAAAATTGGGAATTGATCCTATCACACACAAGCATAAGAATGATACCCTTCTCTCTAGCGACGGTCAATCCAAAACCGTCGCTAATCTCAGTCACATGGCTCAATGGGAAAGTGCTCGTCTTGAAGCTGAAGCAAGACTTGTTAGGGAATCAAAACTTCGTTCACACTCCCTTCAGAACCAACTTGGTAGTTCCACTTTTGCATCTTCATCTTCTGCATCAACCTCAGTTCTTATTATTAATAGTCATAAACAAGATCCATCATCATCAGCATCACCAAGGCTTGATGTATTCAAGGCTTGGAATAATGGAGGGTGGTTGAAATCTAATGAAGTGAGTAATGGTGTTGGGGACCTTGAATCACCAACCTCTACTTTATCTTTCTGTGAGACTGCACCACCAATTATGGCTACTACTAGTGGTGGTGGTGGTGGAATTTTAGGTGAAAACACAATGCCTATGATTGAGTTTGTGGCTTGTTCAGGTTCATCTGTGAAAGAAGAGGGTGATCAAGAATGGAAAGGTTATGAAAGCTCAACCAATTTGACAGAATACAAAGATGGCATAATGGAGAATTCAATGACTACTTTCACGTGTGGTTTGCATGAGTTAACAATGTCAATGGAAGGAGCTACTACTTGGTCAGGGTCTCATGAGTCTCTTAGGACTAATGATCATGCAATTGCTGAACAAGGGTTCACTAATCTTTTGCTCAATGCAAACTCCGGCGACGATCGGAGTTTGTCTGAGGGCGGTGGAGATTCTAATAATCGTGATGATAGTAGTAGTGGTAATGGCAGTGGTGATGATTTTTGCGAAGATAACAAGAACTACTGGAATAGTATTCTTAATCTAGTGACTTCTTCCCCTTCCGATTCCCCGATGTTCTAA 1239 0.4124 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGCWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKLGIDPITHKHKNDTLLSSDGQSKTVANLSHMAQWESARLEAEARLVRESKLRSHSLQNQLGSSTFASSSSASTSVLIINSHKQDPSSSASPRLDVFKAWNNGGWLKSNEVSNGVGDLESPTSTLSFCETAPPIMATTSGGGGGILGENTMPMIEFVACSGSSVKEEGDQEWKGYESSTNLTEYKDGIMENSMTTFTCGLHELTMSMEGATTWSGSHESLRTNDHAIAEQGFTNLLLNANSGDDRSLSEGGGDSNNRDDSSSGNGSGDDFCEDNKNYWNSILNLVTSSPSDSPMF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0102 412 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lan5g0102 412 MobiDBLite consensus disorder prediction 356 386 - -
Lan5g0102 412 CDD SANT 69 112 IPR001005 -
Lan5g0102 412 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan5g0102 412 CDD SANT 16 61 IPR001005 -
Lan5g0102 412 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan5g0102 412 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan5g0102 412 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lan5g0102 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan5g0102 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan5g0102 412 MobiDBLite consensus disorder prediction 356 388 - -
Lan5g0102 412 Gene3D - 69 116 - -
Lan5g0102 412 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 408 - -
Lan5g0102 412 SMART sant 66 114 IPR001005 -
Lan5g0102 412 SMART sant 13 63 IPR001005 -
Lan5g0102 412 Gene3D - 11 67 - -
Lan5g0102 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0102 Lan-Chr5 1257262 1260209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0102 1 412 MYB Transcription Factor Family AT3G01140 52.983 4.77e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan5g0102 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0102 K09422 - gmx:100101835 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0102 5 1257262 1260209 Lan5g0102 5 1257262 1260209 ECH