Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0079 ATGGGGTTTGGAAATAATGCAATTGAAGTTGGTAGTTTAGATGTTGGAAAGTCAAAGGTAGATGGTAATGAAGAGAAGAAGAGAGGGTGTTGGCCTAAATTCACTTTCTGTGGAAACTGCATACCTTCAACTTCAAAGGTTGATACTTCCATAAGTGCCACTAGTACCCAAAATGTGGGAAAAAAGTCATCATTTGTAAAAAGCACAAATGAAACGGTTCCTCCTCCAGAGTCCTCATCACCAACTAGTAATGCGGAAAGTATCCCTTCAACTCCAAAATTCAGTGAAGAGTTGAAGGTTGCTTCTAGTTTGAGAAAATTCACATTCAATGGTCTTAGGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTCGGCGAAGGAGGATTCGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAACGGAACTGCACCTATGAAACCAGGCACGGGGCTAACCGTCGCAGTCAAGACCCTCAACCACAACGGAAAGCAGGGTCACAAAGAATGGCTTGCCGAGTTAAACTATCTTGGTGACCTTCTCCATCCTAATCTAGTTAAACTGATTGGTTTCTGCATTGAAGATGACCAAAGATTACTAGTTTACGAGTTTATGCCCCGAGGCAGTTTGGATAACCACCTCTTTAGAAAAGGGCCCTTGCCTCTTCCATGGTCTATCAGAATGAAAATTGCACTTGGTGCCGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTAAGAGGCCGATAATATATCGTGATTTCAAGACATCTAATATTCTGTTAGATGCGGAATACAATGCGAAGCTCTCTGATTTTGGACTTGCCAAAGACGCTCCTGAGGGGGAAAAGACACATGTATCGACAAGAGTTATGGGAACGTATGGTTATGCTGCTCCGGAGTATGTTATGACAGGGCATTTGACATCGAAGAGTGATGTCTACAGTTTTGGAGTAGTGCTACTGGAAATGCTCACTGGTCGGCGATGTATTGATAAGAGAAGACCAACTGGGGAACACAATCTGGTGGAGTGGGCAAGACCTATGCTTGGAAACTGGAGGATGTTCCTCCGGATAATGGATCCACGCCTTGAAGGTCACTTCTCGGTTAAAGGGGCACAGAAAGCATCTCAGCTAGCTTCTCAGTGCCTTAGCCGAGATCCGAAAGCTAGGCCTTTGATAAGTGAAGTTGTTAAAGCTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCTAACTCATCTTATAACTTCCAGGATGCGCGAGTAGACCGAACCTTGTCCATGCCGAATTGCAAAAATGTGATTAAAACACAGTTAGTGTCTTTACCGAAAAAGGGTCAAGCTATAAGGACCTTGTCAAGTTCAAGTGCACAACATGGTTCTCCATATCCTCATTATAACAAGTCTCCAAAATCAGATGAAAGAAAGTGA 1428 0.4356 MGFGNNAIEVGSLDVGKSKVDGNEEKKRGCWPKFTFCGNCIPSTSKVDTSISATSTQNVGKKSSFVKSTNETVPPPESSSPTSNAESIPSTPKFSEELKVASSLRKFTFNGLRVATRNFRPESLLGEGGFGCVFKGWIEENGTAPMKPGTGLTVAVKTLNHNGKQGHKEWLAELNYLGDLLHPNLVKLIGFCIEDDQRLLVYEFMPRGSLDNHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAKRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRCIDKRRPTGEHNLVEWARPMLGNWRMFLRIMDPRLEGHFSVKGAQKASQLASQCLSRDPKARPLISEVVKALKPLPNLKDMANSSYNFQDARVDRTLSMPNCKNVIKTQLVSLPKKGQAIRTLSSSSAQHGSPYPHYNKSPKSDERK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0079 475 MobiDBLite consensus disorder prediction 449 475 - -
Lan5g0079 475 MobiDBLite consensus disorder prediction 51 91 - -
Lan5g0079 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lan5g0079 475 PANTHER OS01G0588500 PROTEIN-RELATED 54 465 - -
Lan5g0079 475 Gene3D Phosphorylase Kinase; domain 1 99 204 - -
Lan5g0079 475 PANTHER RECEPTOR-LIKE KINASE PLANT 54 465 - -
Lan5g0079 475 SUPERFAMILY Protein kinase-like (PK-like) 93 400 IPR011009 -
Lan5g0079 475 ProSiteProfiles Protein kinase domain profile. 119 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0079 475 CDD STKc_IRAK 125 403 - -
Lan5g0079 475 ProSitePatterns Protein kinases ATP-binding region signature. 125 157 IPR017441 GO:0005524
Lan5g0079 475 Pfam Protein kinase domain 122 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0079 475 Gene3D Transferase(Phosphotransferase) domain 1 205 424 - -
Lan5g0079 475 MobiDBLite consensus disorder prediction 449 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0079 Lan-Chr5 955565 963987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0079 105 418 Glycoside Hydrolase AT3G07070 54.114 1.12e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan5g0079 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0079 - - gmx:100499647 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0079 5 955565 963987 Lan20g1230 20 18022894 18027908 LSH