Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0068 ATGCACTTTTACCCTTTCCATAGAACACAACAAACCCATCTTCAAAATCAAAATTTTATCACTCCCTTCACCTCAAAAATGCATAAAAATCAAACCTTTACACTTAATTTTATCCTTTTCAGCTTCATAACATTCTGGGTCTTCTTCGTTTATTCCCAGGACGAAGACAACGTGAGATGTCTCAAAGGGATAAAAAAAACACTCCATGATCCTCAAAATCGCCTCTCCACGTGGCAGTTCGAGAACAACACCGTTGGTTTCATCTGCGACTTTGTTGGAGTTTCATGTTGGAATCAGAGAGAGAATAGGGTTATTGAGTTGGATCTTCGAGATTTTAAGTTATCGGGTCAGATCCCAGATTCTCTTAAATACTGTGGTAATAGTCTTCAAAAATTGGATCTTGGGTCTAACTTGTTGAGTTCTGAGATTCCCTCTGAGATTTGTAGTTGGATGCAGTTTTTGGTGCATTTGGATTTGTCAGATAATCAGCTTAGTGGGAATATTCCACCCACATTTGAGAACTGTTCTTATTTGAATGCATTGATGCTTCAAAACAATGATCTTAGTGGTTCTATTCCTTATGAATTTGGTGGTTTGAATAGGCTTAAGAAGTTTTCTGTTGCTAATAATCACCTTAGTGGGGCTATTCCTGCTTTTTTTAGTGGCTATGATAAGGAGGATTTTGTTGGGAATGATGGGTTGTGTGGGGGTCCTCTTGGATCTAAGTGTGGTGGGTTGAGTAAGAAGAGTCTTGCTATTATTATCGCTGCTGGCGTGTTCGGCGCCGCGGCGAGTTTGTTATTGGCTTTTGGGGTTTGGTGGTGGTATCATTTGAGGTTGAGTGGGAGGAGTAAGAGAGGGTATTGGGTTGGTGGCACGATTGGTGATGAAAATTGGGTTGCGAGATTGATAGGTTTTAAACTTGTTCAGGTTACTCTTTTTCAGAGACCTATTGTGAAGGTTAAGTTAGGGGACTTGTTGGCTGCTACTAATAATTTTAGTGCCAAAAATGTTATTATTTCGACGAGGACAGGGACTACTTATAAGGCGGATCTTCTGGATGGATCGACGCTCGCAGTGAAGAGGTTGAATACTTGTAAGAGTGGGGAGAAGCAGTTTCGGATGGAGGTGAATCGGCTAGGGCAGGTGAGGCATCCAAATTTGGCACCACTTTTGGGATTCTGTGTTGTGGAGGAGGAGAAGCTTTTGGTTTATAAGCATATGTCAAACGGGACTTTGTATTCGTTGTTGCATGAAAATGGCAGCGGTGTTTTGGATTGGTTGATGAGGTTTAGGATAGGGCTTGGCGCGGCTAGGGGTCTTGCCTGGCTGCACCATGGGTGCCATCCTCCGATTATACAGCAGAACATTTGCTCCAATGTGATTCTTGTCGATGAGGATTTCGATGCTAGGTTAATGGACTTTGGACTTGCAAGGCTTATGACATCTAACTCCAATAGTAATTTTGTGAATGGGGACTTGGGGGAACTCGGGTATATAGCTCCGGAATATCCGAGCACCCTTGTTGCTTCGTTGAAAGGAGATGTGTATGGATTTGGCGTCTTGCTTTTAGAGTTGGTCACTGGGCGCAAACCTCTTGAAGTGAGCAACAGCGAGGAAGAATTTAAGGGTAACTTAGTGGATTGGGTGAATATGCATTATAGCTTGGGTCGAATAAAGGATTGCATTGACAGAGCCATATCGGGAAGGGGACATGATGAGGAGATTCTGCAGTTTCTGAAAGTTTCATTGAACTGTGTAGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCGTTAAAGGGTATATCCAAATTCCACAGTTTCTCTGAACATGACGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAACAAGTCGGCGTAG 1899 0.426 MHFYPFHRTQQTHLQNQNFITPFTSKMHKNQTFTLNFILFSFITFWVFFVYSQDEDNVRCLKGIKKTLHDPQNRLSTWQFENNTVGFICDFVGVSCWNQRENRVIELDLRDFKLSGQIPDSLKYCGNSLQKLDLGSNLLSSEIPSEICSWMQFLVHLDLSDNQLSGNIPPTFENCSYLNALMLQNNDLSGSIPYEFGGLNRLKKFSVANNHLSGAIPAFFSGYDKEDFVGNDGLCGGPLGSKCGGLSKKSLAIIIAAGVFGAAASLLLAFGVWWWYHLRLSGRSKRGYWVGGTIGDENWVARLIGFKLVQVTLFQRPIVKVKLGDLLAATNNFSAKNVIISTRTGTTYKADLLDGSTLAVKRLNTCKSGEKQFRMEVNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLYSLLHENGSGVLDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARLMDFGLARLMTSNSNSNFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNSEEEFKGNLVDWVNMHYSLGRIKDCIDRAISGRGHDEEILQFLKVSLNCVVSRPKDRWSMYQVYHSLKGISKFHSFSEHDDEFPLIFGKPENKSA* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0068 632 CDD STKc_IRAK 341 607 - -
Lan5g0068 632 Gene3D Phosphorylase Kinase; domain 1 296 407 - -
Lan5g0068 632 Pfam Leucine rich repeat 154 212 IPR001611 GO:0005515
Lan5g0068 632 Pfam Protein tyrosine and serine/threonine kinase 354 540 IPR001245 GO:0004672|GO:0006468
Lan5g0068 632 ProSiteProfiles Protein kinase domain profile. 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0068 632 Pfam Leucine rich repeat N-terminal domain 56 97 IPR013210 -
Lan5g0068 632 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Lan5g0068 632 Gene3D Transferase(Phosphotransferase) domain 1 408 625 - -
Lan5g0068 632 SUPERFAMILY L domain-like 54 224 - -
Lan5g0068 632 PANTHER - 39 625 - -
Lan5g0068 632 PANTHER OS07G0107800 PROTEIN-RELATED 39 625 - -
Lan5g0068 632 Gene3D Ribonuclease Inhibitor 55 245 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0068 Lan-Chr5 827367 829582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0068 42 630 Receptor kinase-like Gene Family AT3G28450 63.317 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lan5g0068 PK_Tyr_Ser-Thr 1.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0068 - - lang:109347314 1280.77