Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0061 ATGGATAGTTCAGAAAAGGTTGTTGCTGTGATTATGGTGGGTGGACCCACTAAAGGAACCAGATTTCGACCTCTTTCATTCAATACTCCAAAACCACTTTTCCCTTTGGCTGGCCAGCCAATGGTTCATCATCCTATCTCTGCTTGTAAAAGGATACCCAATTTGGCTCAAATATATCTGGTTGGATTCTATGAGGAGCGAGAATTCGCTTTATATGTCTCTTCAATTTCAAATGAGCTGAAATTACCAGTGAGATATTTGAAAGAGGATAAACCACATGGTTCGGCAGGTGGCCTTTACTACTTCAGAGATATTATCATGGAAGACAGTCCATCCCATATCTTTCTGCTAAATTGTGACGTTTGCTGCAGTTTTCCACTGCCATCCATGCTTGAAGCCCACAGAAGATATGGTGGGATGGGGACAATGTTGGTAATCAAGGTGTCTGCTGAATCTGCCAGTGAGTTCGGTGAGTTAGTTGCTGATCCAACCACTAATGAGTTGCTGCATTATACTGAGAAACCTGAAACTTTCGTCAGCGATTTGATAAATTGCGGTGTCTACATTTTTACCCCTGATATTTTTAATGCCATCGAAGATGTGTCTTTGAATCGGGAAGGCAGAGCTAATCTACGTCGTGTCTCCAGCTTTGAAGCACTCCAATCTGCCACAAGGACTCTCCCTTCAGATTTTGTAAGACTGGATCAAGATATATTATCTCCTCTAGCTGGAAAGAAGCAACTGTATACATACGAGACAAAGGATTTCTGGGAGCAAATTAAAACTCCGGGAATGTCTTTGAAATGCTCCGAGTTGTATCTTGCTCAATTCCGGTATACTTCACCGCATCTTTTGGCCAGTGGAGATGGTAAAAGGAATTCTACTATTGTCGGTGACGTATATATTCATCCTTCGGCAAAAGTTCATCCATCTGCAAAGATCGGTCCCAATGTTTCAATCTCAGCTAATGTTCGTGTAGGTCCTGGCGTCAGGTTGATCAGTTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCTCTAGTTCTAAATTCTATCGTTGGATGGAAGTCGTCGATCGGAAGATGGTCAAGGGTGCAGGCTGATGGTAATTTCAATGCTAAGCTTGGCACAACCATTCTAGGAGAAGCTGTGATAGTTGAAGATGAGGTGGTGGTGACCAACAGCATAGTTCTTCCTCATAAGACTCTTAATGTTAGTGTACAAGATGAAATCATCTTATAA 1245 0.4185 MDSSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYLVGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLEAHRRYGGMGTMLVIKVSAESASEFGELVADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFNAIEDVSLNREGRANLRRVSSFEALQSATRTLPSDFVRLDQDILSPLAGKKQLYTYETKDFWEQIKTPGMSLKCSELYLAQFRYTSPHLLASGDGKRNSTIVGDVYIHPSAKVHPSAKIGPNVSISANVRVGPGVRLISCIILDDVEIKENALVLNSIVGWKSSIGRWSRVQADGNFNAKLGTTILGEAVIVEDEVVVTNSIVLPHKTLNVSVQDEIIL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0061 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Lan5g0061 414 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 414 - -
Lan5g0061 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Lan5g0061 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Lan5g0061 414 Gene3D Hexapeptide repeat proteins 286 413 - -
Lan5g0061 414 Pfam Nucleotidyl transferase 9 212 IPR005835 GO:0009058|GO:0016779
Lan5g0061 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0061 Lan-Chr5 743646 749280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0061 19 200 Eukaryotic Initiation Factors Gene Family AT2G34970 22.477 4.96e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0061 K00966 - fve:101314646 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0061 5 743646 749280 Lan8g0880 8 10515586 10521161 LSH