Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0042 ATGGCTGAAAGGTGCAAAAAGAGGATAAGTTTTAGCAAATTATATTCCTTTTCTTGTTTCAAATCTGTAAATGGAGATGGTCATTCACAAATTGGGCAGAGAGGGTTCTCTAGGGTTGTGTATTGCAACGATCCGGATAATCCGGAAGTGATTCGGTTGAGTTATAGAAGAAACTATGTTTCAACAACCAAGTATACATTTTTCAACTTTATCCCAAAGTCATTGTTTGAGCAGTTCCGGAGGGTTGCGAATATCTACTTTCTTGTTGTGGCATGTGTTTCGTTTAGTGCATTGGCACCTTATACGCCCGTAAGTATTGTTGCGCCTTTGTTGTTTGTGATCGGAGCTACAATGGTAAAGGAAGCTGTCGAAGATTGGAAGCGAAGAAGGCAGGATATAAAGGCAAATAACCGAAAGGTTCAGGTATATAGTAGGAGTCATACATTTGTGGAGAGTAGATGGAAGAAACTCCGTGTTGGTGATATCGTTAAAGTGTATAAGGACGAATACTTTCCTGCTGATCTACTTCTGCTTTCATCAAAATATGACGACGGGGTTTGCTATGTCGAGACAATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCCTTGGAGGAGACGAATCATCTTCGCGATGAAAATTCTCTCCGAAAGTTTAGTGCTATTGTCAAATGTGAAGATCCAAATGAAAATCTTTACTTATTTATTGGAAATTTATACTATGATGATAAAGAGTATCCTCTTTCCTTGCAGCAAATCCTTTTAAGAGGTTCTAAGTTGAAAAACACCGAATATATCTACGGTGTTGTTATCTTTACTGGCCCGGATACAAAAGTGATGCAGAATTCCACGGACCCTCCATCTAAGAGAAGCAAAATCGAGAGGAAAATGGATAAGATAATCTACATCCTCTTCAGTTCCTTGATATTCGTATCCTTTATAAGTTCTCTCTTTTTTGGTGTCGAGACAAAAAGGGATATTAGTGATGGAAGGTACAGAAGATGGTATCTTCTTCCGTCTGATTCGACTGTATTTTACGATCCTAGGAACGCGACGTTTGCAGCTATTCTTCATTTTTTGACTGCTCTTATGTTGTATGGATATCTGATTCCAATATCACTTTACGTGTCCATAGAACTTGTGAAAGTTCTGCAGAGTACATTCATCAACCGAGATCAGGAAATGTATTATGAAGAAACCGATAGGCCGGCTCGTGCACGCACGTCTAATCTGAATGAGGAACTCGGACAGGTTGAGACGATATTGTCCGACAAAACTGGTACTTTGACATGTAACTCGATGGAATTTGTCAAATGTTCCATAGCCGGTGTTCCATATGGCCGTGGTATGACAGAAGTGGAGAAAGCACTTGCAAGGAGAAGGGGAAGTCATGAATCTGGAGTTGACGATGTTTCATCCGATGTGACAGGCCTAAGTAGTGATGCAGTTGAATCTCAACAGCGGATTAAGGGATTTAATTTTCGAGATGAGCGCATAATGAATGGACAATGGGTTAATGAAGCACATTCAGACATAATACAGAAGTTCTTTCAAGTTCTAGGTATTTGTAATACAGCTATTCCTGATGTAGATGAAGAATCGGGAGAAGTTTTGTATGAAGCTGAGTCGCCGGATGAAGCAGCGTTTGTCATAGCTGCAAGGGAACTTGGATTTGAACTTCGTGCAAGGACGCAAACAAGCATATCATTGCATGAACTGATCAATGAAAGCGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCTCGGAAAAGAATGTCCGTGATAATAAGGAATGAGGAAAATCAATTATTGCTCCTCTGCAAGGGTGCAGACAGTGTTATGTTTGAGAGACTCTCGCAAAATGGAAGACAGTTTGAGGCTGAAACCAAAGATCATATCAAAAGATATGCCGAAGCTGGTTTAAGAACTCTTGTAATCGCATACCGTAAACTTGGTGAAGAAGAATATAAATTGTGGGAAGAGGAGTTTTCAAAGGCCAAAGCTTCAGTATCTGCAAACCGAGATGCATTGGTGGATACATCTGTTGATAAGATGGAAAAAGATTTGATACTTCTTGGTGCTACCGCGGTTGAGGATCGGCTGCAAAGCGGGGTTCCTGAGTGTATTGATAAGCTTGCACAAGCCGGAATCAAGTTATGGATATTGACCGGGGACAAGATGGAAACTGCAGTAAACATCGGATATGCTTGTAGTTTACTTAGGCAAGATATGAAGCAGATAGTGATCTCTCTTGATTCACCTGACATTTTATCCTTGGAAAAACACGGAGATACGGAGGCTCTAGTGAAGGCCTCTCTTGGAAGCGTGAAGAAGCAAATTTTTGAGGGAATTTCCGAAATCAAGTCAGCGAAAGAGAGTTTTAATACAGAAAAGGGAAGTTCTTCATTTGCCTTGATAATCGATGGGAAGTCCTTGGATTTTTCTCTTAGCAAGAATTTGGAGAGTTCATTCTTTGAGCTGGCGACTAACTGTGCTTCTGTCATATGCTGCCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACAGGGAAGGCAACATTATCTATCGGCGATGGGGCGAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGTGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCTCAATTCCGATTTTTGGAGCGTTTGTTATTGGTTCATGGTCATTGGTGCTATAGGCGAATATCGATGATGATATGCTATTTCTTCTATAAAAACATTGCATTTGGATTCACCCTATTTTGGTTCGAGGCCTACGCTTCTTTCTCGGGTCAACCTGCGTACAACGATTGGTACATGTCATTTTACAACGTCTTCTTCACTTCACTTCCGGTAATCGCTCTTGGTGTTTTCGATCAGGATGTTTCGGCTCATCTTTGCCTAAAGCATCCCTTTCTATATCTAGAGGGAGTAGAGGACACTCTCTTCAGCTGGCCACGGATTATCGGCTGGATGCTGAACGGAGTGATTAGTTCATTACTCATATTCTTCGTAACCACGAATTCATCGTTAAACCAAGCCTTCAGAAAAGATGGTCAAATAGTTGGTTATGAAATACTTGGTGTAACAATGTACACATGTGTAGTTTGGACAGTAAATTGCCAAATAGCACTTTCCATTAACTACTTCACATGGATTCAACATTTTTTCATATGGGGTAGCATTGGATTTTGGTATATATTTTTGTTAGTATATGGTTATTTTTCACCAACTATATCTACAACAGCTTATAGGGTATTTTTAGAAGCATGTGCTTTTAGTGCTTTATATTGGTTAGTTACACTTTTGGTTCTTGTGTGTGTTTTATTACCTTATTTTTGTTATAGGAGTTTCCAAACTAGGTTTCTACCAATGTACCATGATGTTATACAAAGAAAAAACAAGTAG 3486 0.4005 MAERCKKRISFSKLYSFSCFKSVNGDGHSQIGQRGFSRVVYCNDPDNPEVIRLSYRRNYVSTTKYTFFNFIPKSLFEQFRRVANIYFLVVACVSFSALAPYTPVSIVAPLLFVIGATMVKEAVEDWKRRRQDIKANNRKVQVYSRSHTFVESRWKKLRVGDIVKVYKDEYFPADLLLLSSKYDDGVCYVETMNLDGETNLKLKHALEETNHLRDENSLRKFSAIVKCEDPNENLYLFIGNLYYDDKEYPLSLQQILLRGSKLKNTEYIYGVVIFTGPDTKVMQNSTDPPSKRSKIERKMDKIIYILFSSLIFVSFISSLFFGVETKRDISDGRYRRWYLLPSDSTVFYDPRNATFAAILHFLTALMLYGYLIPISLYVSIELVKVLQSTFINRDQEMYYEETDRPARARTSNLNEELGQVETILSDKTGTLTCNSMEFVKCSIAGVPYGRGMTEVEKALARRRGSHESGVDDVSSDVTGLSSDAVESQQRIKGFNFRDERIMNGQWVNEAHSDIIQKFFQVLGICNTAIPDVDEESGEVLYEAESPDEAAFVIAARELGFELRARTQTSISLHELINESGKKVDRVYQLLHVLEFSSSRKRMSVIIRNEENQLLLLCKGADSVMFERLSQNGRQFEAETKDHIKRYAEAGLRTLVIAYRKLGEEEYKLWEEEFSKAKASVSANRDALVDTSVDKMEKDLILLGATAVEDRLQSGVPECIDKLAQAGIKLWILTGDKMETAVNIGYACSLLRQDMKQIVISLDSPDILSLEKHGDTEALVKASLGSVKKQIFEGISEIKSAKESFNTEKGSSSFALIIDGKSLDFSLSKNLESSFFELATNCASVICCRSSPKQKARVTRLVKLGTGKATLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAHLCLKHPFLYLEGVEDTLFSWPRIIGWMLNGVISSLLIFFVTTNSSLNQAFRKDGQIVGYEILGVTMYTCVVWTVNCQIALSINYFTWIQHFFIWGSIGFWYIFLLVYGYFSPTISTTAYRVFLEACAFSALYWLVTLLVLVCVLLPYFCYRSFQTRFLPMYHDVIQRKNK* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0042 1161 SFLD p-type atpase 408 923 IPR044492 -
Lan5g0042 1161 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 844 954 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0042 1161 SUPERFAMILY Calcium ATPase, transduction domain A 142 284 IPR008250 -
Lan5g0042 1161 Gene3D - 112 287 - -
Lan5g0042 1161 Gene3D - 539 701 IPR023299 GO:0000166
Lan5g0042 1161 Pfam Cation transport ATPase (P-type) 525 629 - -
Lan5g0042 1161 Pfam E1-E2 ATPase 136 330 - -
Lan5g0042 1161 CDD P-type_ATPase_APLT_Dnf-like 57 1032 - -
Lan5g0042 1161 SFLD C1.7: P-type atpase like 408 923 - -
Lan5g0042 1161 SUPERFAMILY HAD-like 419 927 IPR036412 -
Lan5g0042 1161 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan5g0042 1161 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lan5g0042 1161 Pfam Phospholipid-translocating P-type ATPase C-terminal 900 1150 IPR032630 -
Lan5g0042 1161 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lan5g0042 1161 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Lan5g0042 1161 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1150 IPR023298 -
Lan5g0042 1161 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 1 1159 - -
Lan5g0042 1161 Gene3D - 702 912 IPR023214 -
Lan5g0042 1161 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 704 IPR023299 GO:0000166
Lan5g0042 1161 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lan5g0042 1161 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0042 Lan-Chr5 477672 488489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0042 9 1157 Primary Pumps ATPases AT1G68710 63.243 0.0 1566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0042 K01530 - gmx:100817020 1936.38