Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0041 ATGGAGCATGCATCAGAAAAAAGGTTTCCTCTCCATGCAAAAGATTATGAATTATATGAAGAAGTTGGTGAAGGTGTTAGTGCCTCGGTATACAGGGCCCTCTGTATTCCTCTCAATGAGACAGTTGCCATCAAGGTTCTCGATCTCGAGAAGTGCAATAACGATCTGGATGGCATTAGGAGAGAGGTGCAGACCATGAGCTTGATTAATCATTCAAATGTTTTACGGGCACATTGCTCTTTTACCGCTGGACACAACCTTTGGATTGTGATGCCATACATGGCTGGAGGGTCTTGCCTTCACATAATGAAATCTTCTTATCCTGAGGGTTTTGACGAACCTGTTATTGCTACTTTATTGCTTGAGGTTCTCAAGGCTCTTGTCTATCTTCATGCCCATGGTCACATACATAGAGATATTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTTCAGTCAAAGTAGCTGACTTTGGGGTGTCAGCATGTATGTTCGATACTGGAGATAGGCAGCGTTCGAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTCATGCAGCAATTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATCACGGCACTTGAACTTGCTCATGGTCATGCTCCATTTTCCAAGTATCCACCGATGAAAGTTTTACTAATGACTTTGCAAAATGCCCCTCCTGGTCTCGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTGAAAGATCCAAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCATCACTTCTTTAAACATGCCCGTCCCACCAGTTATCTTGCTCGCACCATTCTAGATGGCCTTGCTCCATTAGGAGATCGTTTTAGAATGCTGAAGGCAAAAGAGGCAGATTTACTGGTGCAGAACAAGGCTCTTTACGAGGATAAGGAACAATTATCTCAGAAAGAGTATATTCGAGGAATTAGTGCCTGGAATTTCAACCTGGAGGATTTAAAAACTCAAGCTGCTCTCATTCAAGATGATGGCATCCCAAATGCAGAAGTGCTACAAATGGATAAGAAGCAGGACAACCAATATGATGACTTCAAGATTCCAGCAGAGACGCTATCTGCAGTTGCACCTAATCATTTAGATGCTGCACCCACATTGGATAAGGAGGATGGATTCAACAATCTTCAAGATTTGGAGAGTTCACTTGGTTCATTTCCTATTAAACCTCTCCAAGCACTTAAAGGTTGTTTTGATATATGTGAGGATGATGTCAATAATACTAGTCCAAGAGACAACAATGAAAGTTCTGGACCAAGTAGTTCGTTGCCGCAAAATGCTATAAATCAGAATAAAAAGTTTTCGAGTGGTTCTTTGTTGCCTGATAATTTTCTTTCTCCGAAAAAGGTTGTTACTGATGGGGACAGGGATTACCTACAAACGAAATATTATTCTGAGCGCAATCATAGTGGTCCATTGTTACTTCGGCAAAAGAGAGATACCAACAACCTTCCTTTGGTTGATGACACATCAGAAGGTGCAGTTGTCCAGCGCAAGGGGCGGTTTAAGGTCACATCGGCAGATCCAATGGGTCCTTCAAATAGCAATTCTGGCCCAGTTTTTGGAGGTCCTAGCAGTCCACCGAATCAGAAATCCGTGGCTGCCTCTATTCTTCATCCACTGCAGTGTATCTTGCAACAGAACAGTTTGCAGAGGGAAGAAATTATTAAATTAATAAAGTATGCTGAAAATTCTTCTGCCAAGAATACAGAATCGGCCGAGGCAGGGGCAGTTGATCATTCACAGGTACCACCTGTGACAAGTAGGGAGAAAGAGCTGAATTTTCAGGTGATTCAACTCCAACAGAGCATTGGGACTCTTGTTGAGGAACTTCAAAAACAAAGATTGAGAAATGTTCAGTTAGAGAAGCAATTGAGCTCTAAGGCCAACAAAGTTGAAAAATGA 1992 0.4167 MEHASEKRFPLHAKDYELYEEVGEGVSASVYRALCIPLNETVAIKVLDLEKCNNDLDGIRREVQTMSLINHSNVLRAHCSFTAGHNLWIVMPYMAGGSCLHIMKSSYPEGFDEPVIATLLLEVLKALVYLHAHGHIHRDIKAGNILLDSNGSVKVADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARPTSYLARTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKTQAALIQDDGIPNAEVLQMDKKQDNQYDDFKIPAETLSAVAPNHLDAAPTLDKEDGFNNLQDLESSLGSFPIKPLQALKGCFDICEDDVNNTSPRDNNESSGPSSSLPQNAINQNKKFSSGSLLPDNFLSPKKVVTDGDRDYLQTKYYSERNHSGPLLLRQKRDTNNLPLVDDTSEGAVVQRKGRFKVTSADPMGPSNSNSGPVFGGPSSPPNQKSVAASILHPLQCILQQNSLQREEIIKLIKYAENSSAKNTESAEAGAVDHSQVPPVTSREKELNFQVIQLQQSIGTLVEELQKQRLRNVQLEKQLSSKANKVEK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0041 663 MobiDBLite consensus disorder prediction 537 557 - -
Lan5g0041 663 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0041 663 Gene3D Transferase(Phosphotransferase) domain 1 97 307 - -
Lan5g0041 663 Coils Coil 633 660 - -
Lan5g0041 663 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0041 663 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0041 663 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 660 - -
Lan5g0041 663 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lan5g0041 663 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Lan5g0041 663 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 660 - -
Lan5g0041 663 MobiDBLite consensus disorder prediction 439 469 - -
Lan5g0041 663 CDD STKc_OSR1_SPAK 14 277 - -
Lan5g0041 663 MobiDBLite consensus disorder prediction 499 557 - -
Lan5g0041 663 MobiDBLite consensus disorder prediction 435 469 - -
Lan5g0041 663 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0041 Lan-Chr5 462226 472306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0041 1 656 MAP Kinase Kinase Kinase Kinase AT5G14720 66.471 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lan5g0041 Pkinase 3.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0041 K08835 - gmx:100784402 1103.2