Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0035 ATGGACAAAAGACCGTGTAACTCATCTGAAGATCCTGAAGTGAGAAAGGGTCCATGGACTATGGAAGAAGACATGATCTTGATAAACTATATAGCAAATCATGGTGAAGGTGTATGGAACTCTTTAGCCAAAGCTGCTGGTCTTAAACGCACCGGAAAGAGTTGTCGGCTCCGGTGGCTAAACTATCTCCGCCCTGATGTTAGAAGAGGAAATATTACATCGGAGGAACAACTTTTGATCATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCTAAAATTGCAAAGCATCTCCCAGGAAGAACTGACAACGAGATTAAGAACTTCTGGAGGACTAGGATTCAAAAACACATTAAACAAGCCGAGAATTTCCAACAACAAAGTACTTCTGATCCAACAAACGATAATCACCATCATCATCAAGCAAGCACTAGTCAAATGTCGACAAACATGTCTCAACACGAACCCATGGAAACAACTTATTCACCATCTTCATACCAAGGAACAACATTGGATCCTATATTTCCAACTCATCAGTTTCCAACATTAATCCCTGATCAACCTAGTTGTTGTCCTACCAATGACAACACCGATTGGAGCATGGAAGATATCTGGTCAATGTGA 624 0.4135 MDKRPCNSSEDPEVRKGPWTMEEDMILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITSEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAENFQQQSTSDPTNDNHHHHQASTSQMSTNMSQHEPMETTYSPSSYQGTTLDPIFPTHQFPTLIPDQPSCCPTNDNTDWSMEDIWSM* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0035 207 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lan5g0035 207 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 207 - -
Lan5g0035 207 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Lan5g0035 207 CDD SANT 73 112 IPR001005 -
Lan5g0035 207 MobiDBLite consensus disorder prediction 139 165 - -
Lan5g0035 207 Gene3D - 16 68 - -
Lan5g0035 207 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Lan5g0035 207 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lan5g0035 207 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lan5g0035 207 Gene3D - 72 151 - -
Lan5g0035 207 CDD SANT 18 63 IPR001005 -
Lan5g0035 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lan5g0035 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lan5g0035 207 SMART sant 68 116 IPR001005 -
Lan5g0035 207 SMART sant 15 65 IPR001005 -
Lan5g0035 207 MobiDBLite consensus disorder prediction 120 165 - -
Lan5g0035 207 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 207 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0035 Lan-Chr5 408337 412142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0035 10 205 MYB Transcription Factor Family AT3G01530 58.794 1.37e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan5g0035 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0035 K09422 - gmx:778046 320.472