Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0026 ATGGCATCTTCATCAAGCTATTCAAATTGTCCATGTGCAGCATGCAAGTTTCTAAGAAGGAAATGCATGCCAGATTGTGTTTTTGCCCCATATTTCCCACCAGAAGAGCCTCAAAAGTTTACAAATGTTCACAAGATATTTGGTGCAAGTAATGTGAGTAAACTTCTGAATGAAGTTCTACCTCATCAAAGGGAAGATGCAGTGAACTCTCTAGCTTATGAAGCTGAAGCAAGGATAAAAGATCCAGTTTATGGTTGTGTTGGTGCTATTTCTGTGCTCCAAAGACAAGTTATGAAGCTTCAAAAGGAACTTGATGCTACAAATGCTGATTTGATAAGATATACTTGTAATGAAATGCCAACAACAACAACAATAATTACTACTTCTCAAAGGGGTAGTGAAAGAGGAACTTCCTCTATTGCTCAATCTTCTAGTTTTTATTATCATTCTACTTGGAACAATGATCATCCATGA 474 0.3671 MASSSSYSNCPCAACKFLRRKCMPDCVFAPYFPPEEPQKFTNVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVMKLQKELDATNADLIRYTCNEMPTTTTIITTSQRGSERGTSSIAQSSSFYYHSTWNNDHP* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0026 157 Coils Coil 90 110 - -
Lan5g0026 157 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lan5g0026 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 155 - -
Lan5g0026 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 4 155 - -
Lan5g0026 157 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0026 Lan-Chr5 309616 311036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0026 1 114 AS2 family AT5G63090 84.211 2.13e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan5g0026 LOB 1.5e-42 No_clan