Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0025 ATGGCGGGGTTAGAGGAATTGAGAAAAAAGCTTGCACCTTTGTTTGATGCTGATAAGGGTTTCTCTACAACTTCAACTTTAGACCCTTCTGATTCTTACACTCTATCAGATGGTGGAACCGTAAACTTGTTGAGCAGATCATATGGAGTGTACAATATCAATGAGCTTGGGTTGCAAAAGTGCACATCAGATGAAAGCGAACACAGTGAGAAAACATATAATTGTGCTTCGAATGAGATGAGAATATTCGGGGCAATAGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATACATATACCAACTCATAGGATTCTAGCATTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTACTTACCGAGATAAGGACGTTGTGTGAAGCACCTTGTTACGAGGGTCTTGTAGAATTTCATGGTGCATTTTACACTCCAGATTCTGGACAAATAAGCATAGCATTGGAGTACATGGATGGAGGATCGCTTGTAGATATACTGAGAAAGCATAGAAGAATACCCGAACCTATCCTTTCATCCATGTTTCAAAAGCTTCTACATGGTCTAAGCTATCTGCACGGAGTGAGACATTTAGTTCACAGAGACATAAAGCCTGCTAATTTACTCGTAAATCTCAAAGGGGAGCCCAAAATTACTGATTTTGGTATTAGTGCTGGCTTAGAGAATTCCGTGGCAATGTGCGCTACATTCGTTGGAACTGTTACTTACATGTCACCTGAGAGAATTCGAAATGAAAGCTATTCTTATCCAGCTGATATTTGGAGCCTTGGTCTTGCTCTCCTCGAGTGTGGGACGGGAGAATTCCCGTATACGGCGAGCGAAGGTCCCGTCAATCTTATGTTGCAGATCCTGGATGATCCATCACCGTCGCCATCAAAGCAAACATTTTCACCCGAATTTTGCTCCTTTGTTGATGCATGCTTACAAAAGGATCCAGATATTAGGCCGACAGCAGAACAGCTTCTTTTGCACCCTTTTATTACAAAGCATGAGACTGCCAAGGTAGATTTAGCAGGATTTGTTCGAAGCGTTTTCGACCCTACGCAAAGAATGAAGGACTTGGCCGATATGTTGACAATACATTATTATTTACTATTTGATGGACCGGTTGATTTGTGGCAACATACAAGGAACTTATATAATGAAAGCTCCGTTTTCAGTTTCTCAGGGAAACAACATATTGGTCCTAACAACATCTTCACAACACTATCAAGTATTAGAAGTACATTATTTGGTGATTGGCCTCCTGAAAAGTTGGTGCATGTGGTCAAGAAGCTTCAGTGCCGCGCTCACGGTGAAGACGGAGTCGCGATCCGGGTATCGGGATCCTTCATAATTGGTAACCAGTTCCTGATATGTGGAGATGGAATTCAAGTAGAGGGTTTGCCAAATTTTAAGGATCTTGGTATTGATATTAGTAGCAAGAGAATGGGTACATTTCATGAACAATTTATTGTGGAACCAACTACCCTTATTGGATGCTACAACATAGTTAAACAAGAGTTGTATATTAACCAATAA 1548 0.4121 MAGLEELRKKLAPLFDADKGFSTTSTLDPSDSYTLSDGGTVNLLSRSYGVYNINELGLQKCTSDESEHSEKTYNCASNEMRIFGAIGSGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLVDILRKHRRIPEPILSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTASEGPVNLMLQILDDPSPSPSKQTFSPEFCSFVDACLQKDPDIRPTAEQLLLHPFITKHETAKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPVDLWQHTRNLYNESSVFSFSGKQHIGPNNIFTTLSSIRSTLFGDWPPEKLVHVVKKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDISSKRMGTFHEQFIVEPTTLIGCYNIVKQELYINQ* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0025 515 CDD PKc_MAPKK_plant_like 81 340 - -
Lan5g0025 515 PANTHER - 2 514 - -
Lan5g0025 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lan5g0025 515 Pfam Protein kinase domain 84 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0025 515 SUPERFAMILY Protein kinase-like (PK-like) 81 396 IPR011009 -
Lan5g0025 515 SUPERFAMILY NTF2-like 361 513 IPR032710 -
Lan5g0025 515 SMART serkin_6 80 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0025 515 ProSiteProfiles Protein kinase domain profile. 80 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0025 515 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 514 - -
Lan5g0025 515 Gene3D Transferase(Phosphotransferase) domain 1 162 361 - -
Lan5g0025 515 Gene3D Phosphorylase Kinase; domain 1 53 161 - -
Lan5g0025 515 ProSiteProfiles Nuclear transport factor 2 domain profile. 363 513 IPR018222 -
Lan5g0025 515 Gene3D - 362 513 - -
Lan5g0025 515 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0025 Lan-Chr5 301253 306185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0025 35 515 MAP Kinase Kinase Gene Family AT5G40440 79.752 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lan5g0025 Pkinase 2.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0025 K20607 - gmx:100784935 971.074