Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0014 ATGGGATCTGGGAATGAGGTTCATTCGGTTGAAGATTTCAATTTAGATGCTAAGTGGATTATAGATCCAAAAGAATTATTTGTTGGTCCAAAAATTGGTGAAGGTGCTCATGCCAAAGTCTATGAAGGGAAATATAAAAATCAGAATGTTGCTGTTAAGGTTATCAACAAGGGAGAAACTCCTGAAGAGATTTCGAGGAGAGAAGCTCGGTTTGGTAGAGAGGTTGCTATGTTGTCCAGGGTTCAACACAAGAATCTGGTTAAGTTTATTGGGGCCTGCAAAGAACCAGTTATGGTTATAGTAACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCTTGAACATGCGGCCGAAGTGTTTGGATATGCGAGTGGCAGTTGGATTTGCTCTTGATATTGCTCGAGCGATGGAATGCTTACACTCCCATGGGATCATTCACCGTGACCTTAAACCTGATAACTTGATCTTGACAGAAGATCATAGAACAATTAAACTTGCTGATTTTGGTCTAGCCAGAGAAGAGTCGTTAACGGAGATGATGACTGCTGAAACAGGAACGTATCGTTGGATGGCTCCAGAACTTTACAGCACGGTGACTCTAAGACAAGGCGAGAAGAAGCATTACAACCATAAGGTGGATGCGTACAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAGGTGCCCTTTGAAGGCATGTCTAATCTACAAGCAGCATACGCAGCCGCTTTTAAGAATACAAGGCCTAGTGCTGAAGACATTCCTGAGGATTTAGCTCTGATTGTAACTTCATGTTGGAAAGAGGATCCAAAGGAGCGACCGAATTTTACCGAAATCATACAGATGCTCCTTCGGTATCTCTGTACTATTTCACCATCAATGTCGGTCGCTCCTTTGCAGAGGATGACTTCATCTGAGAATGCTGTATTGCCACCGGAATCTCCCGGAACACGTGCTTTAATGGCAACAAGAGATGATTCTATAGAAACACCAAAAGCAGCCAATATGGAAGACAGGCCTAAAGGGTTTTTGTTCTGCTTTAACCATTGTTATTGA 1065 0.4235 MGSGNEVHSVEDFNLDAKWIIDPKELFVGPKIGEGAHAKVYEGKYKNQNVAVKVINKGETPEEISRREARFGREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTEDHRTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNTRPSAEDIPEDLALIVTSCWKEDPKERPNFTEIIQMLLRYLCTISPSMSVAPLQRMTSSENAVLPPESPGTRALMATRDDSIETPKAANMEDRPKGFLFCFNHCY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0014 354 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Lan5g0014 354 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Lan5g0014 354 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Lan5g0014 354 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Lan5g0014 354 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Lan5g0014 354 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0014 354 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Lan5g0014 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lan5g0014 354 CDD STKc_MAP3K-like 32 286 - -
Lan5g0014 354 MobiDBLite consensus disorder prediction 307 337 - -
Lan5g0014 354 PANTHER PROTEIN KINASE ATN1 1 330 - -
Lan5g0014 354 SUPERFAMILY Protein kinase-like (PK-like) 17 312 IPR011009 -
Lan5g0014 354 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0014 354 Gene3D Transferase(Phosphotransferase) domain 1 107 312 - -
Lan5g0014 354 PANTHER SERINE-THREONINE PROTEIN KINASE 1 330 - -
Lan5g0014 354 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0014 Lan-Chr5 174807 177691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0014 9 354 MAP Kinase Kinase Kinase AT5G50180 76.301 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan5g0014 PK_Tyr_Ser-Thr 8.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0014 - - gmx:100808329 625.55