Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0009 ATGCATATACAGAAACAGAGTCTGCAGCAATTTTGGGTCCAACAGCTATTGGATATTCGAAATACCGAAGCATTTAGGAACAACAAACAATTGCCTCTATCTCGAATTAAAAGGATTGTGAAAGCAGACAAGGATGTGAAGATGGTGAGTGCTGAAGTTCCATTATTTATGGCAAAAGCATGTGAGATTTTCATTCAGGAGTTAACCCTTCGAGCATGGATTCTTACTCAAGACAAAGAGAGTTGCACCCTTCAGAATGGTGACATTGCTAAAGCTGTTCAGAAAATACATGTCCTTCATTTCCTCACCAATCTTCTTCACTGTGATCAGCTTCAATTTTACGAGGTCGATCTTTTCTTTTTTCTCTTTCTTAACTTGTATTTGGGTTCATTATTATAA 399 0.3734 MHIQKQSLQQFWVQQLLDIRNTEAFRNNKQLPLSRIKRIVKADKDVKMVSAEVPLFMAKACEIFIQELTLRAWILTQDKESCTLQNGDIAKAVQKIHVLHFLTNLLHCDQLQFYEVDLFFFLFLNLYLGSLL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0009 132 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 4 112 IPR027170 GO:0003700|GO:0006355|GO:0016602
Lan5g0009 132 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 93 IPR003958 -
Lan5g0009 132 SUPERFAMILY Histone-fold 26 107 IPR009072 GO:0046982
Lan5g0009 132 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 112 - -
Lan5g0009 132 Gene3D Histone, subunit A 1 107 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0009 Lan-Chr5 106218 106803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0009 8 112 CCAAT-HAP5 Transcription Factor Family AT1G56170 51.429 4.58e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lan5g0009 CBFD_NFYB_HMF 2.6e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0009 K08066 - lang:109346916 236.498