Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1892 ATGGAAAATGATGGCTCGGTGCTGTTACTCTGTGCTTCTCAACACCAAAAGACAAAGCTTTTCCTGTCTGGTATGCCAACGTTGCTTCTGTTACTGTTGTTGCTTCTCTCTCCATTTGCTTCACCACTCACTCAACAAGGCCAAGCATTAATGGAGTTGAAAAGTAGCTTCACAAACATAGCCGATGTTTTGCTTGAATGGGATGACATTCACAATAATGATTTCTGCTCGTGGCATGGTGTTTACTGTGATAATGTCACCTTCACTGTTCAATCTCTGAATCTGTCAAACTTGAATCTGGGTGGAGAGATATCCACTGCCATTGGTGATCTACCCAACTTGCAATCCTTAGACTTTTCGGGGAATAAACTAACAGGACAAATCCCTGATGAAATTGGAACCTGTGCTCAACTTATACATTTGGATTTGTCTGAAAATCAGCTATATGGTGATATACCATTCTCCATTTCCAAGCTAAAACAACTCGAGTTTTTGAATTTAAAGAATAATCAGTTGACTGGTCCAATCCCCTCTATTTTAACACAAATTCCAAACCTAAAGATTCTTGATCTTGCTCAAAATAGGTTCACAGGGGAGATACCAAGACTACTCTATTGGAGTGAAGTGTTACAGTACTTAGGGTTGAGAGGGAACATGTTGACTGGAACTTTGTCCCCTGATATGTGTCAGTTAACTGGTTTAGGTTATTTTGATGTGAGAGGCAATAATTTGACGGGAACTATACCTGACAGTATTGGGAACTGCACAAGTTTTGAAATCTTGGATTTATCATACAATCAGATAACTGGGGAGATCCCTTATAATATTGGTTTTCTGCAAGTAGCTACTTTGTCACTTCAAGGAAATAGACTTACTGGAAAGATTCCAGAAGTGATCGGTTTAATGCAAGCCCTTGCTATTTTGGATTTGAGTGAAAATGAGTTGGTTGGACCCATCCCTCCAATACTGGGCAACCTGACGTTTACTGGCAAGCTTTACCTTCATGGAAACAAGCTTAGTGGCTCAATACCTCCCGAGCTTGGGAATATGTCTAAACTGAGCTACTTGCAATTGAATGGAAATCAACTAGTTGGTAGTATTCCTGACGAATTTGGAATGCTGGAAAATCTCTTTGAATTAAATCTTGCAAATAATCATCTGGAAGGATCGATTCCTCATAACATAAGCTCGTGCACTGCGTTAAATCAGTTTAATGTTCATGGTAATCACTTGAGTGGTTCCATTCCTCTGAGCTTCCGCAGCCTTCAAAGTCTGACTTACTTAAACCTTTCTGCCAACAACTTCAAAGGCAATATACCTGTGGAATTGGGTCATATTGTTAATCTTGATACACTAGATCTGTCCAGCAATAAATTTTATGGACATGTCCCAGCATCTGTTGGCTTTCTGGAGCATCTCCTGACCCTGAATTTGAGCCATAACCACCTTGATGGTCCTTTGCCTGCTGAATTTGGTAATCTTAGAAGCATGCAGATCCTGGATATGTCATTTAACAATCTGTCCAATAGTTTACCTCCGGAGTTTGGCCAGCTGCAAAACATTATGTCTCTGATTTTAAACAACAATAACCTGTGTGGGGAGATTCCAGATCAATTAACCAACTGTTTCAGTCTTATGTCTCTGAACTTTTCTTACAACAACCTTTCTGGAGTTGTGCCTTCTACGAAAAATTTCTCACGGTTTTCAGCTGATAGCTTCATTGGGAATCCTTTACTATGTGGGAATTGGTTAGGATCAATATGCCATCCTTTCATATTGACATCCAGAGTGGCTTTCTCAAAAGTTGCAATTGCGTGTCTCTTATTTGGAATTGTCATATTATTGGCCATGGTAACTGTTGCTGCCTATAGATACAGCCAATCAAAGCTCCTGATGAACGAACTGAGCAAAAGTGTCCAAGGGCCTCCTAAACTTGTAATTCTTCGTATGGATATGGCTATCCACACCTTAGAGGACATTTTTAGAAATACCGAGAATCTGAGCGAGAAATATGCTGTAGGGTATGGTGCCTCTAGTACTGTATACAAATGTGTTTTGAAAAATTCTCGACCAATTGCAGTTAAGCGATTGTTCAATCAACATGCACACAACTTAAAGGAGTTTGAGACAGAACTTGAAACAGTTGGCAGCATCAGGCATAGAAACCTTGTCACCTTACATGGCTATGCTCTTACTCCCTTTGGGAATCTCCTTTTCTACGATTATATGCCAAATGGCTCTTTGTGGGATCTTCTTCACGGTCCCTCAAAGGTAAAACTTGATTGGGAGACACGCATGAAGATAGCTGTTGGTGCTGCTGAAGGACTTGCTTATCTCCATCATGACTGCAACCCTAGGATTGTTCACAGAGATGTAAAATCTTCGAATATCCTGCTCGATGAGAACTTTGAGGCCCACCTCTCTGATTTTGGCACTGCTAAATGCATGTCAGCCACAAAAACTCACACCTCAACTTATGTGCTTGGCACAATAGGCTATATTGACCCGGAGTATGCCCGAACTTCAAGATTGAATGAAAAGTCAGATGTCTATAGCTTTGGCATTGTTCTGCTAGAGCTACTTACTGGGAAGAAAGCAGTGGACAATGACTCTAACTTGCATCAATTGATAATGTCGAAGGCGGATAACAACACTGTAATGGAGGCTGTGGATCCTGAAGTTTCTGTGACTTGCATTAGTGAGGGTAATGTTAAGAAGGCATTTCAGCTTGCTCTACTTTGCACAAAGAGAAACCCTTCAGAGAGGCCTACCATGTATGAGGTTGCAAGGGTTTTGGTATCACTACTCCCTGCAACTCCTAATACTAAAATCCATGCTCCCCCATCAAAGGTGTTTGATTATAAGCATTTTGTGATGGAGAAGGGAGGACAAAGACAATCTCAGCATGATAGCAACATTTCATCTAATGCACCATGGTTTTTTCCATTTGGTGATGTTATATCCAACAACTCCCTTTAA 2979 0.4068 MENDGSVLLLCASQHQKTKLFLSGMPTLLLLLLLLLSPFASPLTQQGQALMELKSSFTNIADVLLEWDDIHNNDFCSWHGVYCDNVTFTVQSLNLSNLNLGGEISTAIGDLPNLQSLDFSGNKLTGQIPDEIGTCAQLIHLDLSENQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSILTQIPNLKILDLAQNRFTGEIPRLLYWSEVLQYLGLRGNMLTGTLSPDMCQLTGLGYFDVRGNNLTGTIPDSIGNCTSFEILDLSYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLTFTGKLYLHGNKLSGSIPPELGNMSKLSYLQLNGNQLVGSIPDEFGMLENLFELNLANNHLEGSIPHNISSCTALNQFNVHGNHLSGSIPLSFRSLQSLTYLNLSANNFKGNIPVELGHIVNLDTLDLSSNKFYGHVPASVGFLEHLLTLNLSHNHLDGPLPAEFGNLRSMQILDMSFNNLSNSLPPEFGQLQNIMSLILNNNNLCGEIPDQLTNCFSLMSLNFSYNNLSGVVPSTKNFSRFSADSFIGNPLLCGNWLGSICHPFILTSRVAFSKVAIACLLFGIVILLAMVTVAAYRYSQSKLLMNELSKSVQGPPKLVILRMDMAIHTLEDIFRNTENLSEKYAVGYGASSTVYKCVLKNSRPIAVKRLFNQHAHNLKEFETELETVGSIRHRNLVTLHGYALTPFGNLLFYDYMPNGSLWDLLHGPSKVKLDWETRMKIAVGAAEGLAYLHHDCNPRIVHRDVKSSNILLDENFEAHLSDFGTAKCMSATKTHTSTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLIMSKADNNTVMEAVDPEVSVTCISEGNVKKAFQLALLCTKRNPSERPTMYEVARVLVSLLPATPNTKIHAPPSKVFDYKHFVMEKGGQRQSQHDSNISSNAPWFFPFGDVISNNSL* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1892 992 Gene3D Ribonuclease Inhibitor 323 591 IPR032675 -
Lan4g1892 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 34 971 - -
Lan4g1892 992 Gene3D Ribonuclease Inhibitor 43 206 IPR032675 -
Lan4g1892 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 34 971 - -
Lan4g1892 992 Pfam Protein kinase domain 670 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1892 992 SUPERFAMILY Protein kinase-like (PK-like) 643 932 IPR011009 -
Lan4g1892 992 Pfam Leucine Rich repeat 472 485 IPR001611 GO:0005515
Lan4g1892 992 Pfam Leucine Rich repeat 254 271 IPR001611 GO:0005515
Lan4g1892 992 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Lan4g1892 992 Gene3D Transferase(Phosphotransferase) domain 1 743 946 - -
Lan4g1892 992 Pfam Leucine rich repeat 401 459 IPR001611 GO:0005515
Lan4g1892 992 ProSiteProfiles Protein kinase domain profile. 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1892 992 SMART LRR_typ_2 231 255 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 374 398 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 494 517 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 470 493 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 350 373 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 422 446 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 159 182 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 183 207 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 302 330 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 111 135 IPR003591 -
Lan4g1892 992 SMART LRR_typ_2 518 542 IPR003591 -
Lan4g1892 992 SUPERFAMILY L domain-like 74 279 - -
Lan4g1892 992 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Lan4g1892 992 SMART serkin_6 667 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1892 992 Gene3D Ribonuclease Inhibitor 207 322 IPR032675 -
Lan4g1892 992 SUPERFAMILY RNI-like 225 562 - -
Lan4g1892 992 Gene3D Phosphorylase Kinase; domain 1 631 742 - -
Lan4g1892 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1892 Lan-Chr4 27199006 27206539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1892 113 992 Receptor kinase-like Gene Family AT5G07180 73.326 0.0 1298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lan4g1892 Pkinase 7.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1892 K20718 - gmx:100811653 1572.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0816 8 10075242 10081233 Lan4g1892 4 27199006 27206539 LSH