Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1884 ATGGATACGAATCCTAACCGGGATGGTGATTTCAGCGAAGAAGACGACACACCCAGTTCAGAGACGATTCCGATGGTTGATTCGCCGCAGGCTGCTCCGGCGACGGCGGATTCACTGAAAGAAGAACACACAGACACGGTGGGAGAGTCTATTCCGATGGGTCTTATTCCGGTGCCATTGACAATGTCAAGGCCGGTGCCGGTGAAGAAACCGTCAAAGGACCGGCACACAAAAGTGGAGGGTCGTGGCCGGAGAATTCGAATGCCGGCAACCTGCGCCGCCAGGATATTCCAGCTGACACGTGAACTCGGCCACAAGTCCGACGGCGAAACAATCCGGTGGTTATTAGAACGCGCTGAACCGGCGATAATAGAAGCCACCGGTACCGGAACTATCCCGGCCATCGCGGTATCCGTTGGTGGGACGTTAAAGATTCCAACTTCATCAGCAGCAAGGGTAGATGGTGAAGACAGTGTAAGAAAGAGAAGAAGAAGAGCATCAAATAGTGAATTCATTGAAGTGAATGAGCAAGGTTCAGTTTCTTCAGGGCTTGCACCAATAGCACAAAATTCTTATATTGGTGGCTCACAAAATGGACTAGTTCCATTGTGGTCTAATAATAATAATAACAACAATGGTGCATTCTTTATGCCTCAATATTGGGCTATACCAGCAAGTGCTGCACCATTTTTTAATTTTCAACAAGGAGTAAGACCTGTCTCAGGTTTTGTTTCTGCTATTCAAATGCAACCACATCAATTAACTACTACTAATACTACTACTAATACTACTTCATCCACAATGGCTCCTAGTTTGAGTTCTGGTACTAGTGCTGGTGTTACCACTATTACTACAACTTCTGTTACCTCTTCCTCTTCTAGTGCTACAACTACTCAGATGCTCAGGGATTTCTCTCTTCAGATTTATGACAAGAAAGAGATCACATTTATGGCTCTCTCTGATGCCAACTCAGAACCATCTTCTAGTTCCAAACCTTGA 999 0.4585 MDTNPNRDGDFSEEDDTPSSETIPMVDSPQAAPATADSLKEEHTDTVGESIPMGLIPVPLTMSRPVPVKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARVDGEDSVRKRRRRASNSEFIEVNEQGSVSSGLAPIAQNSYIGGSQNGLVPLWSNNNNNNNGAFFMPQYWAIPASAAPFFNFQQGVRPVSGFVSAIQMQPHQLTTTNTTTNTTSSTMAPSLSSGTSAGVTTITTTSVTSSSSSATTTQMLRDFSLQIYDKKEITFMALSDANSEPSSSSKP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1884 332 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 330 IPR005333 GO:0003700
Lan4g1884 332 MobiDBLite consensus disorder prediction 1 81 - -
Lan4g1884 332 Pfam TCP family transcription factor 72 155 IPR017887 -
Lan4g1884 332 MobiDBLite consensus disorder prediction 256 278 - -
Lan4g1884 332 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Lan4g1884 332 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 23 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1884 Lan-Chr4 27158614 27163738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1884 63 317 TCP Transcription Factor Family AT5G51910 50.000 9.65e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan4g1884 TCP 7.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1884 - - gmx:100819475 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0041 20 209079 210327 Lan4g1884 4 27158614 27163738 LSH