Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1860 ATGAACATTGTTGTTGTTATATTATTGTATTTGGTGACAGTAACACCATGGCTTGTTTGTTCCCAACAACATAAGCTTCTTGTCAAAATGACAATTGTCAACAACGCTCATGAAACCACTGCTCTTTGTTTGGATGGGAGTTTACCAGCTTATCATTTAGACAGAGGAAGTGGAAATGGACAGAATAACTGGATTCTACAATTCGAGGGAGGTGGATGGTGCAATGACTTGGCTTCATGCATAGAGAGAGCCAAGACTTATAGAGGCTCAACAACTTACAAGTCTAAGTTGGAGTCCTTTTCTGGCATTTTGAGTAACCATCCTTCCCTTAATCCAGACTTTTATAACTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCTTTCACTGGAGACACTGTCTTCACTAATGGGACAAAGACTCTTTATTTCAAAGGGCAAAAGATTTGGGAAGCTATTATTAATGACCTTATACCAAAAGGTTTGGGAAAAGCAAGCAAGGCCTTGCTTTCAGGTTGTTCTGCTGGAGGTTTAGCCACCTTCCACAAATGTGACAACTTGGCTGCACGTTTGCCGAATGCTAATGTTAAATGCCTGAGCGATGCAGGGTTTTTTCTGGACGCGGAAGATATAAGTTCGAAATACACTGCAAGAAGCTTCTTCAGAGGTGTTGTTGAATTGCATGGAGTAAAGAAGAATCTTAATACAAAATGCACAAGTGCACAGAACTCTCCAGATTTGTGCTTCTTTCCACAATATGCATTGAAATACATATCACCACCCTATTTTATCTTGAATACTGCCTATGATGTATACCAATTCCATAATATATTGGTGCCCACTTCTTCTGATAAGCAAGGAAAATGGACCAACTGCAAAAAGAACCCAGCAGCATGCACACCAGACGAAATTAACACATTGCAAGGTTTTAGGAGCTACATGCTTGATACTTTAAAACCATTCACTTTAAATTCAGAAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAATCTGAATCCAAAGATTGGTTTGGACCTGATTCTCCAAGAGTAAACAACAAGACTATTGCAAAAGCTGTTGGTGATTGGTATTTTGACAGAAAGAAAAGCAAAGAAATAGATTGTGAATATCCATGTGATAAAACATGTCATAATCTTATCCCACAAACTCAGGGTTCAGCGAACCTGAGTTTTCTAATAATGGATTGA 1221 0.389 MNIVVVILLYLVTVTPWLVCSQQHKLLVKMTIVNNAHETTALCLDGSLPAYHLDRGSGNGQNNWILQFEGGGWCNDLASCIERAKTYRGSTTYKSKLESFSGILSNHPSLNPDFYNWNRVKLRYCDGASFTGDTVFTNGTKTLYFKGQKIWEAIINDLIPKGLGKASKALLSGCSAGGLATFHKCDNLAARLPNANVKCLSDAGFFLDAEDISSKYTARSFFRGVVELHGVKKNLNTKCTSAQNSPDLCFFPQYALKYISPPYFILNTAYDVYQFHNILVPTSSDKQGKWTNCKKNPAACTPDEINTLQGFRSYMLDTLKPFTLNSERGGMFINSCFAHCQSESKDWFGPDSPRVNNKTIAKAVGDWYFDRKKSKEIDCEYPCDKTCHNLIPQTQGSANLSFLIMD* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1860 406 Pfam Pectinacetylesterase 21 373 IPR004963 GO:0016787
Lan4g1860 406 PANTHER NOTUM-RELATED 18 392 IPR004963 GO:0016787
Lan4g1860 406 PANTHER PECTIN ACETYLESTERASE 9 18 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1860 Lan-Chr4 27035177 27039966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1860 4 394 Carbohydrate Esterase AT5G23870 62.025 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1860 K19882 - gmx:100794453 578.17