Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1859 ATGGCTCCAAAGCAGCCAAGTACGGGTCTTTTTGTTGGATTGAACAAGGGTCACGTCGTTACCAAAAGGGAATTGCCACCACGCCCTAGAGATCGCAAAGGAAAAACAAGCAAAAGAGTGCACTTTGTCAAGAACCTCATTCGTGAGGTTGCTGGTTTTGCACCTTATGAGAAGCGTATCACTGAGTTGCTCAAGGTTGGAAAGGATAAGAGGGCACTGAAAGTTGCAAAGCGAAAGCTGGGAACCCACAAGCGTGCTAAGCGAAAGCGTGAGGAGATGTCCAGTGTTCTCCGCAAGATTAGGTCTGGTGGTGGAGCTAGTGACAAGAAGAAATAA 336 0.4762 MAPKQPSTGLFVGLNKGHVVTKRELPPRPRDRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKIRSGGGASDKKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1859 111 MobiDBLite consensus disorder prediction 87 111 - -
Lan4g1859 111 Gene3D 60S ribosomal protein L36 1 106 IPR038097 -
Lan4g1859 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lan4g1859 111 MobiDBLite consensus disorder prediction 79 111 - -
Lan4g1859 111 MobiDBLite consensus disorder prediction 1 38 - -
Lan4g1859 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Lan4g1859 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lan4g1859 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1859 Lan-Chr4 27028372 27030073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1859 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 82.883 2.53e-60 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1859 K02920 - gmx:100796037 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1095 8 14274487 14276108 Lan4g1859 4 27028372 27030073 LSH