Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1854 ATGCCTTCATGGTGGGGAAAATCTTCATCAAATTCAAAAGAAACCAAGAAGAAAGCGAATAAGGAAAGTTTTATTGATACATTGCACCGGAAATTTAAAATTCCATCTGAAGTTAAACTAAGTAGTAAAACCGGAGGATCTCGTACTCGTAGACATTCCAATGAAACAATTTCAGAGAAGGCAGATAATTCCCCCGCTGACTCAAGGTCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTTTGCACCCTTCAAGTTTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAGAAGGGCTCAAAGGCATTGTTGTTTCTTCCACTTCCAAAACCTGCATGCATGCGTGGTAGGCCGAAGCCTTCAGACTTTGATGGAGATCTGGTCACTGCTTCAATCTCTAGTGATTGCTCTGTTGATAGTGATGAGCCGGCTGAGTCACGTAACCGTAGTCCTCGGGCAACTGACTCTGAGACTGGGACTAGAACTGCTGCGGGCTGTCCTTCCAGTGTGATGCACAAGGATCAGTCGAACGCTGTTTCCCAGCTAAATTCAAGAGAATCAAAAAAACCAGCAAACATTCTGAGCAATCATATGTCTTCTAATTCACCAAAACGGAGGCCTTTACGCAACCATGTTCCAAATCTGCAAGTTCCTCCTCATGGTGCTTTCTACAGTGCTCCTGACAGTTCCTTGTCAAGTCCATCTAGAAGTCCATTGAGAGCATTTGGCACCGATCAGGTGTTGAACTCTACTTTTTATTCTGGAAAGCCATATTCTGAGGTCAATTTCATTGGATCTGGGCACTGCTCTAGTCCAGGCTCTGGTCATAATTCTGGGCATAATTCAATGGGAGGCGATATGTCAGGACAGTTATTTTTGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCGGGCCCAAGCTCGAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCTGGGGGAACACCGAATGAATCACATACAGGATGGGCTGATGAAGGGAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTGGTTGTTACCAATTCTTCGCCTTTCTCTCATTCAAATTCTGCGGCAACATCTCCATCTGTGCCAAGAAGTCCAGCTAGAGCAGATAATCCAATGAGTCCTGGCTCACGTTGGAAAAAAGGGAAGTTGCTTGGTAGAGGCACATTTGGACATGTCTACCTTGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGACGCCAAGTCTAAGGAATGTGCTAAGCAATTAAATCAGGAAATTAATTTATTAAGCCGATTAAGGCATCCAAATATCGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCTGGAGGATCCATATATAAACTTCTTCAAGAATATGGGGAATTTAGTGAACCAGTTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTGTCCATAGAGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGCCGGGTCAAGTTGGCAGACTTTGGCATGGCGAAACATATAACAGGGCAGACATGTCCATTATCATTCAAGGGAAGCCCTTATTGGATGGCTCCCGAGGTTATAAAGAACAACGGGTTGAATCTTGCTGTGGATGTATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGATTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATAGTCTCTCTATTGAAGGAAAAGATTTTGTTAGGAAATGTTTACAACGTGATCCACGCGATCGTCCTTCGGCCAGTGAATTACTGAGTCACCCTTTTGTTAAGTGTACTTCACCTTCGGAAAGATCTAGTCTGGGTCCTGAGTCTTCAGACCCTGTTTCTTGGATTACACATGGAGCAAAAGCTCTGGGCATTGGACAAGGGAGAAACCTTTCTCTTTTGGACTCAGATAGACTCGCTGTTCATTCTTCTAGGGTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCGAGGAATATATCTTGCCCTGTCTCTCCTATTGGAAGCCCACTTTTGAGGTCAAGATCGCCACAACACATGAATGGGAGAATGTCTCCCTCTCCGATTTCAAGCCCTCGGACCGCTTCTGGTGCATCCACGCCTCTCACTGGTGGCAATGGCGCCATTCCATTTGGTAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAACATGCCAAAGTTGTCCTCAAATGGTGTCTACATGAATGTGAATGGCCCTATTCATCATGAATCAAACATTGACATGTTTAGAGGAATGCAAATGGGGTCTCACATGACATCAGAAATGGTTCCCAATGAAATTGATATTCTGGGTAAGCAGTTCGCAAGGCCTCATCTTGCCGAGCCATATGATTTTCAGTCAGTCTTGGCTGATCATGTTGGCCGACAGCTGCTGGGGGATCATGTTAAGATTAATCCATCCCTTGATCTAAGTCCTAACTCATCGTTGCTTAGTCGGGCAAACGGTTTATGA 2718 0.4382 MPSWWGKSSSNSKETKKKANKESFIDTLHRKFKIPSEVKLSSKTGGSRTRRHSNETISEKADNSPADSRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSLGRVDSEISISSKSRLEKGSKALLFLPLPKPACMRGRPKPSDFDGDLVTASISSDCSVDSDEPAESRNRSPRATDSETGTRTAAGCPSSVMHKDQSNAVSQLNSRESKKPANILSNHMSSNSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSTFYSGKPYSEVNFIGSGHCSSPGSGHNSGHNSMGGDMSGQLFLQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESHTGWADEGKQQSHRLPLPPLVVTNSSPFSHSNSAATSPSVPRSPARADNPMSPGSRWKKGKLLGRGTFGHVYLGFNNDSGEMCAMKEVTLFSDDAKSKECAKQLNQEINLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGEFSEPVIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQTCPLSFKGSPYWMAPEVIKNNGLNLAVDVWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPDSLSIEGKDFVRKCLQRDPRDRPSASELLSHPFVKCTSPSERSSLGPESSDPVSWITHGAKALGIGQGRNLSLLDSDRLAVHSSRVLKTNPHASEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLTGGNGAIPFGNHLKQSVYFQEGLGNMPKLSSNGVYMNVNGPIHHESNIDMFRGMQMGSHMTSEMVPNEIDILGKQFARPHLAEPYDFQSVLADHVGRQLLGDHVKINPSLDLSPNSSLLSRANGL* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1854 905 MobiDBLite consensus disorder prediction 59 77 - -
Lan4g1854 905 SMART serkin_6 415 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1854 905 MobiDBLite consensus disorder prediction 126 257 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 749 786 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 160 174 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 749 781 - -
Lan4g1854 905 ProSiteProfiles Protein kinase domain profile. 415 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1854 905 MobiDBLite consensus disorder prediction 375 401 - -
Lan4g1854 905 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Lan4g1854 905 MobiDBLite consensus disorder prediction 11 37 - -
Lan4g1854 905 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 813 - -
Lan4g1854 905 CDD STKc_MEKK1_plant 414 670 - -
Lan4g1854 905 Pfam Protein kinase domain 416 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1854 905 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 813 - -
Lan4g1854 905 SUPERFAMILY Protein kinase-like (PK-like) 403 671 IPR011009 -
Lan4g1854 905 MobiDBLite consensus disorder prediction 290 417 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 175 227 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 1 104 - -
Lan4g1854 905 Gene3D Transferase(Phosphotransferase) domain 1 413 688 - -
Lan4g1854 905 MobiDBLite consensus disorder prediction 290 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1854 Lan-Chr4 27003287 27009157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1854 4 897 MAP Kinase Kinase Kinase AT1G63700 57.748 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan4g1854 Pkinase 2.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1854 K20717 - gmx:100792783 1413.28