Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1847 ATGGCCGCCATAACCTTAAAGCCTTACTCTCTTCTCCGTGCTTCAAACCCTCTTCTCCCTAAGCCATCATCATCCCCAACATTCTTAAGAACATGCTTCTCATACTCCACAATAATGCTTAAATCCCCAACAAGAAAGATCAACACTTTAACCGTTTGTGTCCTCATGGATGATCCAAAACAAGATGAGCAAGAGGAACAAGAACAAGAATCTCAAGTTTTTGTTGTTTCAGAAAGAGTGGCAGAAAAATTGGCTAGGAAAAAATCAGAGAGGTTTACTTATCTAGTTGCTGCTGTTATGTCTAGCTTTGGTATCACTTCTTTGGCTATCTTAGCTGTTTATTATCGATTTTCATGGCAATTGGAGGGTGGAGAAATTCCTTGGCCTGAAATGTTTGGTACATTTGCTTTCTCAATGGGTGCTGCTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAAGGCTCTTTGGCATGCTTCCTTATGGCACATGCATGAGTCTCATCATCGACCAAGAGAAGGAGCATTCGAGCTTAATGATGTTTTTGCAATAATTAACGCTGTCCCTGCCATTGCTCTACTCTCCTATGGTTTTTTCCACAAGGGTCTGGTTCCTGGTCTCTGTTTCGGTACAGGTCTTGGGATTACAGTGTTTGGGATGGCGTATATGTTTGTACACGATGGATTGGTTCATAGGAGATTCCCTGTGGGTCCCATTGCCAACGTCCCCTACTTTAGAAGGGTTGCTGCTGCTCACCAACTCCACCATTCAGAGAAATTCGACGGTGTGCCATATGGGCTGTTTTTGGGACCAAAGGAGCTTGAAGAAGTGGAAGGTCTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATAAAATCATATAATGCTTCATGA 894 0.4306 MAAITLKPYSLLRASNPLLPKPSSSPTFLRTCFSYSTIMLKSPTRKINTLTVCVLMDDPKQDEQEEQEQESQVFVVSERVAEKLARKKSERFTYLVAAVMSSFGITSLAILAVYYRFSWQLEGGEIPWPEMFGTFAFSMGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGAFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGTGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHQLHHSEKFDGVPYGLFLGPKELEEVEGLEELEKEISRRIKSYNAS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1847 297 Pfam Fatty acid hydroxylase 141 268 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lan4g1847 297 PANTHER BETA-CAROTENE HYDROXYLASE 13 294 - -
Lan4g1847 297 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 13 294 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1847 Lan-Chr4 26975176 26977424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1847 42 210 Chloroplast and Mitochondria Gene Families AT4G25700 65.730 1.52e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1847 K15746 - gmx:100802778 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1105 8 14596811 14599571 Lan4g1847 4 26975176 26977424 LSH
Lan8g1105 8 14596811 14599571 Lan4g1847 4 26975176 26977424 PCT
Lan4g1847 4 26975176 26977424 Lan8g1105 8 14596811 14599571 PCT