Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1835 ATGAACATGGAAGGTTTTTGGAGCATGTTTTGTGGGGACTATGGATGTTCAGAAACTAGAGGAAAGCCTTGCAGCTATGATTTTAAGATTTTTGTTGATCCTTCCACTTGTGTCAACCATTTGCTTATAATTTGCATTGATGTGTTACTGCTTCTGATGATCTTGTTCATTATGATCAAGAAGTCATCCTCAAAACAATATCAGGGTCGAATCCGGCTGCAAAGATATTCAATTTTGCAGCTACTTTCTGCCATTGCCAATGGCACTCTTGGCTTGGTGTATCTGTGCTTAGGCATTTGGGTTTTAGAGGAGAAATGGAGGAAAACCCAAACTGCATTGCCTCTTAATTTATGGTTGCTAGAATTCATTCAGGGATTGACATGGTTATTAGTGGGTTTAGCAATGAGCCTTAAGCTTAAACACCTTTCAAGAGCATGGTTGAGGGTGTTTTCTGTTGTAATCTTTTTGGTTTCTGGTATTTTGTGTGCTTCATCATTGTTTTATGCAATTAGAAGTAGAGATCTGACCCTTAAGGTAGCTTTAGATGTTCTCTCATTTCCAGGGGCAATGTTATTGCTACTATGCACATATAAGGAATCTAACCATGAGGACACTGACAGAGAAATTGATGAAAGCCTTTATGCCCCTTTAAATGGTGATTCCAATAAAATTGAATCTGTTGACAATGTAACCCTGTTTGCGAAAGCTGGATTCTTCAATAGGATGTCATTTTGGTGGTTGAATTCATTGATGAAAAGGGGTAAAGAGAAATCACTTCAGGAGGAAGATGTCCCAAAGTTGCGGGAGGATGATCGAGCGGAAAGCTGTTATTTTTTGTTTCTAGACCAGTTGAACAGGCATAAACGGAAGGGTCCGTCTTCGCAACCATCAGTTTTGAAGACAATAGTTTTATGCCATTGGAGAGAGATTTTGATATCAGGGTTCTTTGCATTGCTTAAGGTACTAGCTGTGTGTTGTGGTCCTCTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTTTGCATTGGTCATATCACTTTTTGTTATAAAGATCATAGAATCTTTGTCACAGAGGCAGTGGTATTTCCGATCCAGACTTGTTGGTCTGAAAGTTAGGTCACTACTAACTGCAGCCATTTATAAAAAGCAACTTAGGTTATCCAATTCTGCTAGATTGACGCATTCTGGTGGTGAGATAATGAATTACGTAACCGTGGATGCTTATAGAATTGGCGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCGTCCAGCTATGTATCTCATTAGTAGTACTTATTAATGCTGTTGGGTTAGCGACGGTTGCCTCGCTGGTGGTAGTAGTGGTCACTGTGCTTTGCAATACTCCACTCGCAAAATTGCAGCACAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGCGAGATTGAAGGCTAGTTCCGAGGCTCTAGTGAATATGAAGGTGCTGAAGTTGTACGCATGGGAAACCAGTTTTAAGAATTCTATAGAAGCATTGCGGGATGTGGAAGTCAAATGGTTGTCAGCAGTGCAATTACGAAAGGCGTACAACTCCTTTCTGTTTTGGTCCTCACCTGTTTTGGTCTCAGCTGCTACCTTTGGGGCATGTTACTTTCTTGATGTTCCTTTACATGCAAACAATGTTTTCACTTTTGTAGCTTCTTTACGCCTTGTTCAAGATCCAATTAGAACAATTCCGGATGTTATCGGGGTGGTGATTCAGGCAAAAGTTGCATTTACCAGGATTACAAAATTCCTCGAGGCACCTGAATTGGAGAACTCAAATGTAAAGAAGAGTAGTTTTAATGACAATGTGAGGGGCTCAATTTTAATCAAGTATGCTGACTTTTCATGGGAAGATAATTTATCGAATCCAACATTGAATGACATAAATTTAGAGGTTAGACCAGGGCAAAAGGTGGCAATTTGTGGAGAGGTTGGCTCGGGCAAATCAACCCTTTTAGCAGCAATTCTCAGAGAAGTTCCTATTACTCGGGGCACTATTGATGTTTATGGGAAGTTAGCGTATGTTTCTCAAACAGCATGGATTCAGACAGGTACAATACGAGAAAATGTACTGTTTGGATCAGATATCGATCCTCAAAGATATCAAGAAACACTTCATAGGTCTTCACTAGTGAAGGACCTTGAACTATTTCCCCATGGCGATCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGGATTCAACTTGCTCGTGCTCTTTATCAAAATGCGGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACAGCAACAAGTTTATTTAACGTGATAACAACTTCCCTTTCTCACATGCTGCATTTATACTTTTCAATGTTCTTCACTAAAGATGGCTTTGAAACTTGGCAGGAATACATCATGGAAGGACTTGCAGGGAAGACAGTATTGCTTGTGACACATCAAGTTGATTTCCTTCCAGCATTTGACACTGTTTTGTTGATGTCAGATGGGAAAATCCTGGAATCTGGTCCTTATGACCACCTATTGACCTCAAGCCAAGAGTTTCAAGACCTTGTCAATGCTCACAAAGAAACGGCCGGTTCTGACCGTCCTCTGGATGTTACCTCTTCCAATAGGCCTTCAAATGCTACTGGAGAAATTAAGAAAACATCTATGGAGAATCAGTTTGAAGCATCACAAGGCGATCAACTAATTAAGAAAGAAGAGATAGAAAAAGGAGACCAAGGGTTCAAGCCTTATTTGCAGTATCTGAATCAGAATAGAGGATATATATACTTTGTCGTGGCTGCTCTTTCTCACCTTATATTTGTGATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTTATGTTGACAATCCTGAAGTCAGCACTTTGCGATTGATTATAGTATACTTGTTGTTGGGAGTTATTTCAACATTGTTCTTGTTGATCAGAACTCTTACAACAGTTGCTATGGGCATTCAATCATCGAAGTCCTTATTTTTACAGCTACTAAACTCCCTCTTTCGTGCGCCCATGACATTTTATGACTCCACGCCTTTGGGACGGATACTTAGTAGGGTCTCCTCGGATCTCAGCATTCTCGATCTTGATATCCCATTTGGTTTTGTTTTTGCTGTTGGAGCTACTATCAATTGTTATGCTAATCTTACAGTTTTAGCAGTTGTTACATGGCAAGTCTTGTTTGTCTCTATTCCAATGATTTATTTTGCAATTCGCTTGCAGAAATACTACTTTGCCACGGCAAAAGAATTGATGAGGCTGAATGGCACAACAAAATCATTTGTAGCTAATCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTCTTCACGAAGAATCTTGATCTAATTGATGTTAATGCTAGTCCTTACTTTCATAGTTTTGCTGCAAATGAGTGGTTAATTCAACGTTTAGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCAGCACTTTGTATGGTTGTACTTCCACCTGGAACTTTCTCCTCTGGTTTTATTGGCATGGCTCTCTCTTACGGTCTTTCGCTTAATATGTCCCTAGTCTTTTCAATTCAAAATCAATGCAACATATCAAATTATATAATATCAGTGGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAGAAGTAATAGAAGGAAATCGTCCTCCCGTGAATTGGCCAGTCGTGGGAAAAGTAGAAATACACGATTTGCAGATACGATACAGGCCTGATGCACCCCTTGTACTCCATGGCATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGAACAGGTAGCGGAAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGCTGCTGGGAAAATCATAGTTGATGGCATAGACATTTCTTCTATTGGACTTCATGATTTGAGATCGCGCTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCCGATACAATATGGACCCTTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCTAGAAGTTGTCCAAGAGAAGGAAGAAGGCTTAGACTCCTCAGTGGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAATTATTTTGTTTAGGCCGTGCTCTTTTGCGCAAAAGTCGGGTTTTGGTACTCGATGAAGCGACTGCGTCAATTGATAATGCTACTGATTTGATTCTTCAGAAGACCATTAGAACCGAGTTTGCAGATTGCACAGTAATCACAGTTGCTCATAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCTATCAGTGATGGGAAACTTGAAGAGTATGATGAGCCATCAAAGTTGATGAAGAGAGAAGGGTCATTATTTGGGCAACTTGTAAAGGAATACTGGTCTCATTTTCAGTCTGCAGATTCACATTGA 4527 0.4053 MNMEGFWSMFCGDYGCSETRGKPCSYDFKIFVDPSTCVNHLLIICIDVLLLLMILFIMIKKSSSKQYQGRIRLQRYSILQLLSAIANGTLGLVYLCLGIWVLEEKWRKTQTALPLNLWLLEFIQGLTWLLVGLAMSLKLKHLSRAWLRVFSVVIFLVSGILCASSLFYAIRSRDLTLKVALDVLSFPGAMLLLLCTYKESNHEDTDREIDESLYAPLNGDSNKIESVDNVTLFAKAGFFNRMSFWWLNSLMKRGKEKSLQEEDVPKLREDDRAESCYFLFLDQLNRHKRKGPSSQPSVLKTIVLCHWREILISGFFALLKVLAVCCGPLLLNSFILVAEGNESFKYEGFALVISLFVIKIIESLSQRQWYFRSRLVGLKVRSLLTAAIYKKQLRLSNSARLTHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCISLVVLINAVGLATVASLVVVVVTVLCNTPLAKLQHKFQSKLMVAQDARLKASSEALVNMKVLKLYAWETSFKNSIEALRDVEVKWLSAVQLRKAYNSFLFWSSPVLVSAATFGACYFLDVPLHANNVFTFVASLRLVQDPIRTIPDVIGVVIQAKVAFTRITKFLEAPELENSNVKKSSFNDNVRGSILIKYADFSWEDNLSNPTLNDINLEVRPGQKVAICGEVGSGKSTLLAAILREVPITRGTIDVYGKLAYVSQTAWIQTGTIRENVLFGSDIDPQRYQETLHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATSLFNVITTSLSHMLHLYFSMFFTKDGFETWQEYIMEGLAGKTVLLVTHQVDFLPAFDTVLLMSDGKILESGPYDHLLTSSQEFQDLVNAHKETAGSDRPLDVTSSNRPSNATGEIKKTSMENQFEASQGDQLIKKEEIEKGDQGFKPYLQYLNQNRGYIYFVVAALSHLIFVIGQILQNSWMAAYVDNPEVSTLRLIIVYLLLGVISTLFLLIRTLTTVAMGIQSSKSLFLQLLNSLFRAPMTFYDSTPLGRILSRVSSDLSILDLDIPFGFVFAVGATINCYANLTVLAVVTWQVLFVSIPMIYFAIRLQKYYFATAKELMRLNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFTKNLDLIDVNASPYFHSFAANEWLIQRLETVSAVVLASAALCMVVLPPGTFSSGFIGMALSYGLSLNMSLVFSIQNQCNISNYIISVERLNQYMHIPSEAPEVIEGNRPPVNWPVVGKVEIHDLQIRYRPDAPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAAGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLLEVVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRKSRVLVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLEEYDEPSKLMKREGSLFGQLVKEYWSHFQSADSH* 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1835 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1489 IPR027417 -
Lan4g1835 1508 Gene3D - 621 882 IPR027417 -
Lan4g1835 1508 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 815 1508 - -
Lan4g1835 1508 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 74 791 - -
Lan4g1835 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1835 1508 Gene3D ABC transporter type 1, transmembrane domain 298 611 IPR036640 GO:0005524|GO:0016021
Lan4g1835 1508 CDD ABC_6TM_ABCC_D2 944 1237 IPR044726 GO:0140359
Lan4g1835 1508 Gene3D ABC transporter type 1, transmembrane domain 910 1243 IPR036640 GO:0005524|GO:0016021
Lan4g1835 1508 Pfam ABC transporter transmembrane region 946 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1835 1508 Pfam ABC transporter transmembrane region 311 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1835 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 949 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1835 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Lan4g1835 1508 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Lan4g1835 1508 Pfam ABC transporter 644 778 IPR003439 GO:0005524
Lan4g1835 1508 SMART AAA_5 653 853 IPR003593 -
Lan4g1835 1508 SMART AAA_5 1288 1480 IPR003593 -
Lan4g1835 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 876 IPR003439 GO:0005524
Lan4g1835 1508 CDD ABCC_MRP_domain1 626 853 - -
Lan4g1835 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 818 876 IPR027417 -
Lan4g1835 1508 SUPERFAMILY ABC transporter transmembrane region 935 1242 IPR036640 GO:0005524|GO:0016021
Lan4g1835 1508 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Lan4g1835 1508 MobiDBLite consensus disorder prediction 879 900 - -
Lan4g1835 1508 SUPERFAMILY ABC transporter transmembrane region 299 604 IPR036640 GO:0005524|GO:0016021
Lan4g1835 1508 MobiDBLite consensus disorder prediction 885 900 - -
Lan4g1835 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 803 IPR027417 -
Lan4g1835 1508 Gene3D - 1246 1497 IPR027417 -
Lan4g1835 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 815 1508 - -
Lan4g1835 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 74 791 - -
Lan4g1835 1508 CDD ABCC_MRP_domain2 1260 1480 - -
Lan4g1835 1508 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1835 Lan-Chr4 26897453 26904495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1835 620 907 Calmodulin-binding Proteins AT2G36910 28.664 1.54e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1835 K05666 - gmx:100811468 2420.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0771 8 9853195 9858541 Lan4g1835 4 26897453 26904495 LSH
Lan7g0997 7 9957102 9964208 Lan4g1835 4 26897453 26904495 PCT
Lan4g1835 4 26897453 26904495 Lan7g0997 7 9957102 9964208 PCT