Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1834 ATGGAGGGTTTTTGGAACATCTTTTGTGGGGAATCTAGTTGTTCAAGTGGTGAAGGAAAGCAATGCAGTTTTGATTACAAGTTTTTGATTGATCCTTTCACATGTATCAATCATTTCTTTATCATTTGCATTGATGTGTTACTGCTGAGCATGATCTCATTCACAGTGATCAAGAAGTCGAATCACAAACCATTTCAGCGTCTAATGCGGCTGCAAAGTTATTCAAAATTGCACCTACTGTCTGCCATAGCCAATGGCTCTTTAGGGCTGATACATTTGTGCTCAAGCATCTGGATTTTAGAGGAGAATCTGAGGAAAACTGGAACTGCTTTGCCTCTTGATTGGTGGTTGCTAGAATTCATTCAGGGATTGACATGGTTGTTGTTGTGTTTAACAATAAATCTTCAGCTGAATCAACTTCAAAGAGCATGGTTACTGCTGTTTTCTGTTCTTATCTCATTGGTTTCTGGTATTCTCTGTGTCCTATACTTGTTTTATGCAAATAGTAGCAATGGACTGTCTCTGAAAGTAGCTTTAGATGTTCTATCATTTCCGGGGGCACTTTTATTGCTATTATGCATTTACAAGGAATCTAAGTATGGAGACACTGATAGAGAAAATCATGAAAGCCTTTATGCTCCTTTAAATGATGAGTCCAATATTATTGATTCTATTAGCGATGTTACGCTGTTTTCCAGAGGTGGATTCTTCAATAGGATGTCATTTTGGTGGCTGAGTCCATTGATGAAAAGGGGTAGGGAGAAAACACTTCAGGATGAAGATATTCCGAAGTTGCGGGAGGCTGATCGCGCAGAAAGTTGTTATTTGATGTTTCTTGACCAATTCAACAGACAGAAACAGAAAGAGTTATCATCACAGCCATCAGTTTTGAGGACAATAATTATGTGCCACTGGAAAGAAATTTTGATATCAGGATTCTTTGCATTGCTGAAGGTAATCACCCTCTCATGTGGTCCTTTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTCATGAGAGTTTCAAATATGAAGGCTATGTATTAACCATTTCTCTGGTCTTCACAAAGATCATAGAATCCCTATCACAAAGGCAGTGGTACTTCCGGACCAGACTAATCGGTTTGAAAGTTAGGTCACTGCTTATTGCAGCAATTTATAAAAAGCAACTGAGGCTATCCAATTCTGCTAGATTGACGCACTCGGGTGGTGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATTGGCGAGTTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCGTCCAGCTATGTATTGCGCTAGTAGTACTTTATCGTGCCGTAGGACTAGCAACAATTGCCACATTGGTGGTGATAGCTCTCACCGTGCTTTGCAATACTCCACTTGCGAAGTTACAGCATAAGTTTCAGAGAAAACTTATGGAGGCGCAAGATGAGAGATTGAAGGCTAGTTCGGAAGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGGGAAACCAACTTCAGAAATGCTATAGAAAGATTAAGGAATGTTGAGCTCACAAGGTTGTCTGTAGTGCAATTAAGAAGGGCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTCTCTGCAGCTTCCTTTGGTGCATGTTACCTTCTTGATGTTCCATTGCATGCAAATAATGTTTTCACTTTTGTGGCAACGTTACGCCTAGTTCAAGATCCAATTAGAACCATCCCGGATGTTCTTGGTGTTGTCATTCAAGCAAAGGTTGCATTCGCCAGGATTGTGAAGTTTCTCGAGGCGCCTGAATTAAACAGTGAAAATGTGAGGAAGAGGTATATAAATGATCATAATAGGGGCTCGATTTTAATAAATTCTGCTGACTTTTCATGGGAAGATAATGTGACAAAGCCAACTCTAAGAAACATGAATTTGGAGGTTAGACCAGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTAGCATCAATTCTCAGAGAAGTTCCTCGTACTCGCGGAACTATTGAAGTTTATGGTAAATTCGCCTATGTTTCTCAAACGGCATGGATACAGACGGGTACAATAAGGGAAAATATACTGTTTGGATCAACTATGGACTCTCAAAGATATCAAGAAACACTTCATAGGTCTTCACTAGTAAAGGACCTTGAACTATTTCCCCATGGCGATCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGGATTCAACTTGCTCGTGCTCTTTATCAAAATGCGGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCAACAAATTTGTTTAAGGAATACATCATGGAAGGACTTTCGGAAAAAACAGTCTTGCTTGTAACTCATCAAGTTGACTTTCTTCCAGCATTTGACACTGTTTTGTTGATGTCTGATGGGGAAATCCTACAAGCTGCTCATTATTACAATCTTCTTACCTCAAGCCAAGAGTTTCAGGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCGGATCGGCTTGTGGATGTTACTCCTTCCCGTAAACTATCAAATACTGCTGGAGAGATTACAAAAACATATATGGAGAAGCAGTATGAAGCATCATCACAAGGAGATCAATTAATTAAGAAAGAAGAAAGAGAGAAAGGAGATAGAGGGTTCGAGCCTTACTTACAGTATCTGAATCAAAACAAAGGATACATATACTTCTCTGTGGCTGTTCTTTCGCACTTTACATTTGTGATTGGCCAGATATTGCAAAACTTATGGATGGCAACTAATGTTGACAATCCTCATGTCAGCTTGTTGCAGTTGATTGTAGTTTACTTGTTGATTGGATTTATTTCAACAATTTTCTTGTTGATCAGAAGTCTTGTTGCAGTTGCTTTGGGTCTTCAATCATCAAAATCGATGTTTTTACAGCTACTGAACTCCCTTTTTCGTGCACCTGTATCCTTTTATGACTCGACACCGTTAGGAAGGATACTTAGTAGGGTCTCCTCGGATTTGAGCATTGTCGATCTTGATGTTCCATTCAGCCTTGTTTTTGCTGTGGGAGCTACTGCAACTTGTTATTCTAATCTTGCAGTTTTAGCAGTCATTACATGGCAAGTCTTGTTTGTCTCTATACCAATGATTTACATTGCAATTCGCTTGCAGAGATACTACTTTGCCACCTCAAAAGAATTGATGCGGCTGAACGGCACAACAAAGTCCCTTGTAGCTAACCATCTAGCTGAATCTGTTGCTGGAGCTATAACAATAAGGGCTTTCGAGGAGGAAGATCGTTTTTTTGCGAAGAACCTTGATCTCATTGATGTCAATGCTAGTCCTTTCTTCCATAGCTTTGCAGCGAACGAGTGGTTGATGCTACGGTTAGAAACAATCAGTGCAGTTGTTTTTGCAGCCGTGGCACTTTCCATGGTTGTACTTCCACCCGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCATTGAACACTTCCCTAGTATTTTCAATTCAAAATCAATGCACTATAACAAATCAAATAATATCAGTGGAGAGGCTAAACCAATACATGCACATACCAAGTGAAGCACCAGAAGTAATAGAAGGAAATCGTCCTTGTGCGAATTGGCCAGTTGCTGGAAAAGTAGAAATTCATGATTTGAAGATACGATATCGAGTTGATGCACCCCTTGTACTCCGAGGGATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGAACAGGTAGTGGAAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGCTGCCGGCAAAATCGTAGTTGATGGCATAGACATTGCTTCTATTGGACTTCATGATTTGAGGTCACACTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCCGATACAATATGGACCCGTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAGGTTGTCCACGAGAAAGAAGACGGATTAGACTCCTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAGCGACAATTGTTCTGTTTAGGACGCGCGCTCTTGAGGAAAAGTCGAGTATTGGTACTTGACGAAGCAACTGCATCGATCGATAATGCGACTGATCTGATTCTGCAGAAAACAATTAGGACAGAGTTTGCAGATTGTACTGTAATCACAGTAGCCCACAGAATACCAACTGTGATGGATTGCACCAAGGTTGCTGCCATTAGTGATGGAAAACTGGTAGAGTATGATGAGCCAGTGAATTTGATGAAGAGGGAAGGTTCCTTATTTGGACAGCTTGTGAAAGAGTACTGGTCTCATTTTCAGTCTGCACAATCACACTGA 4443 0.4096 MEGFWNIFCGESSCSSGEGKQCSFDYKFLIDPFTCINHFFIICIDVLLLSMISFTVIKKSNHKPFQRLMRLQSYSKLHLLSAIANGSLGLIHLCSSIWILEENLRKTGTALPLDWWLLEFIQGLTWLLLCLTINLQLNQLQRAWLLLFSVLISLVSGILCVLYLFYANSSNGLSLKVALDVLSFPGALLLLLCIYKESKYGDTDRENHESLYAPLNDESNIIDSISDVTLFSRGGFFNRMSFWWLSPLMKRGREKTLQDEDIPKLREADRAESCYLMFLDQFNRQKQKELSSQPSVLRTIIMCHWKEILISGFFALLKVITLSCGPLLLNSFILVAEGHESFKYEGYVLTISLVFTKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYKKQLRLSNSARLTHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLYRAVGLATIATLVVIALTVLCNTPLAKLQHKFQRKLMEAQDERLKASSEALVNMKVLKLYAWETNFRNAIERLRNVELTRLSVVQLRRAYSNFLFWASPVLVSAASFGACYLLDVPLHANNVFTFVATLRLVQDPIRTIPDVLGVVIQAKVAFARIVKFLEAPELNSENVRKRYINDHNRGSILINSADFSWEDNVTKPTLRNMNLEVRPGQKVAICGEVGSGKSTLLASILREVPRTRGTIEVYGKFAYVSQTAWIQTGTIRENILFGSTMDSQRYQETLHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKEYIMEGLSEKTVLLVTHQVDFLPAFDTVLLMSDGEILQAAHYYNLLTSSQEFQDLVNAHKETAGSDRLVDVTPSRKLSNTAGEITKTYMEKQYEASSQGDQLIKKEEREKGDRGFEPYLQYLNQNKGYIYFSVAVLSHFTFVIGQILQNLWMATNVDNPHVSLLQLIVVYLLIGFISTIFLLIRSLVAVALGLQSSKSMFLQLLNSLFRAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATATCYSNLAVLAVITWQVLFVSIPMIYIAIRLQRYYFATSKELMRLNGTTKSLVANHLAESVAGAITIRAFEEEDRFFAKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAVALSMVVLPPGTFTSGFIGMALSYGLSLNTSLVFSIQNQCTITNQIISVERLNQYMHIPSEAPEVIEGNRPCANWPVAGKVEIHDLKIRYRVDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAAGKIVVDGIDIASIGLHDLRSHFGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLREVVHEKEDGLDSSVVEAGANWSMGQRQLFCLGRALLRKSRVLVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGKLVEYDEPVNLMKREGSLFGQLVKEYWSHFQSAQSH* 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1834 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1234 1468 IPR003439 GO:0005524
Lan4g1834 1480 Pfam ABC transporter 1251 1399 IPR003439 GO:0005524
Lan4g1834 1480 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Lan4g1834 1480 Gene3D ABC transporter type 1, transmembrane domain 281 606 IPR036640 GO:0005524|GO:0016021
Lan4g1834 1480 Gene3D ABC transporter type 1, transmembrane domain 883 1215 IPR036640 GO:0005524|GO:0016021
Lan4g1834 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1461 IPR027417 -
Lan4g1834 1480 Gene3D - 1218 1469 IPR027417 -
Lan4g1834 1480 SUPERFAMILY ABC transporter transmembrane region 920 1216 IPR036640 GO:0005524|GO:0016021
Lan4g1834 1480 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1480 - -
Lan4g1834 1480 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1480 - -
Lan4g1834 1480 Pfam ABC transporter transmembrane region 309 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1834 1480 Pfam ABC transporter transmembrane region 918 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1834 1480 SMART AAA_5 651 824 IPR003593 -
Lan4g1834 1480 SMART AAA_5 1260 1452 IPR003593 -
Lan4g1834 1480 CDD ABC_6TM_ABCC_D2 916 1209 IPR044726 GO:0140359
Lan4g1834 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1834 1480 CDD ABCC_MRP_domain1 624 824 - -
Lan4g1834 1480 Gene3D - 619 853 IPR027417 -
Lan4g1834 1480 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Lan4g1834 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Lan4g1834 1480 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lan4g1834 1480 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016021
Lan4g1834 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Lan4g1834 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1834 1480 CDD ABCC_MRP_domain2 1232 1452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1834 Lan-Chr4 26888952 26896064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1834 596 873 Calmodulin-binding Proteins AT2G36910 27.517 1.24e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1834 K05666 - gmx:100784336 2450.63