Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1832 ATGCATTGTTCTTACTCTTTATTCCTCTTATGGATTATCCATTTCTTCCTCTTCACGTTTCTTTCATCACTTTCTTCATCACCTTCACAAAACATCACACTCTTTGGTGAAGCCTTCTTCTCTGACAACAACTCCATTACCCTCACAAAACAACTACCTACTTGCCTTTCATCTTCATCTTCTGGTGTTGGAAGAGCTTTCTATGTTAACCAAGTTCGGTTTCTTGATCCTATAACTAACTCAACTGCTTCTTTTTCATGCAAGTTCTCTTTTTCAATCCTCTCTTCTTCTTCTTGCCCTTCTAGTGATGGCATTGCTTTCCTCATTTCCTCAACCACAGATTTCACAACCCTCTCTCAGGGTTATATTGGTCTTCCTTCACCACCACCCCTTTTTACCCAAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCTGTTGAATTTGACACAAGTGTTGATAATTCACTGGGTGATATCAATGATAACCACATTGGCATTGATGTTAACAGTGTTGTTTCTTTTGCTACAGTGGATGCTATTTCACATGGGATTGATCTCAAGAGTGGGAGAGTTATAACTGCATGGATTGAGTATAGAGATGCAATCAAAATGGTGAGGGTTTGGGTTAGTTACTCTTATTCAACTAGGCCTTCAACTCCTATTCTTGCTTCAAATGTTGACCTTTCTGATAAGTTTAATGAGTTCATGCATGTTGGTTTCTCTGCCTCTAATGGGCAGGGTTCAAGTTTTCACATTGTTGATCATTGGCAGTTCAAAACTTTTGGTTATGACTCTCATTCAGTGAGTCCTATGGATATGGTTGAAGAAGGGGATTGTTTGTTGTGTTATCCAGGGAATTCTTTCACAGAAACTCAGCACAATGATTCTCATTCTCATGGTCATAGAAAGAAGAAGAATGAAGAGATTGCTCTTGGATTAGGAGGTTTAGCAGCATTTTCGGTGTCCGCGTTCGCCATTGTGGTTGTAATCTGCGTTTTCTTGACAAAGAAGAAAGGTAAAGGTGTTGTTGGTGTTAGACAGATTAGGGAAGGGCAGAGTTGTAGATTTCAGACAAATAAAGTGCCTACAAGATTGTCACTTTCTGAGATAAGATCAGCTACAATGGGATTCAATAGAGATAGGCTTGTTGGGCAAGGTGCATCAGCAAAGGTTTATAAAGGGTCTCTTCCATTTGGAGATGTTGCTGTGAAAAGGTTTGAGAGGGATGATTTGAAAGACTCTACTTTGCACAACCCTTTTGCCACCGAGTTTGCTACAATGGTGGGTTGCTTGAGGCACAAGAACTTGGTCCAGCTTAAAGGGTGGTGCTGTGAAGGGAATGAGTTGGTGTTAGTTTATGAGTTCATGCCCAATGGAAGCCTCAATGAAGTTCTCCATGGGAAGTATGACGATTCTTCATTCGCCCTTTCATGGAAGCAAAGAGTTAAAATAGTTCTAGGGGTTGCTTCTGCTCTTACATATCTCCATGAAGAATGTGAGAGGCAAATCATTCATAGAGATGTTAAGACCTGCAATATAATGCTTGATGCAAATTTCAATTCCAAGCTTAGTGATTTCGGGCTTGCCGAAGTATATGAACACAGCTCTTACAAAACAAGGGATGCTACTATACCAGCAGGAACAATGGGGTATCTTGCTCCTGAATACGTTTATTCGGGTGTTCCAACAGTGAAGACTGATGTGTATAGCTTTGGTGTAGTGGTGTTAGAAGTTGCAACTGGGAGAAAGCCAGTGGAAGATGATGGCACTGTGGTTGTTGACTATGTGTGGAAATTGTGGGAGAAGAAAGAACTCATTGAGGGTGCTGACCCAACATTGATGGGAAAATTTGATGTGTTGGAAATGGAAAGAATGCTATTGGTGGGGCTTCTTTGTGTGCACCCTGATTATGAGAAAAGGCCAACAGTGAGAGATGCAGCTAGGATTCTTAAGAAAGAAGCACCTATTCCATTGGTGCCATCAAGTAAACCAAGGGTGAGAATTAGGCCTAATTGTCCTAATGATACACCTGAGACACAAACAGTTGTAGGGGATTGGGCTAGTACAGATGAGGGTCTCTATTTGACACCTAGGAGTGAGTTTTACTAG 2118 0.4089 MHCSYSLFLLWIIHFFLFTFLSSLSSSPSQNITLFGEAFFSDNNSITLTKQLPTCLSSSSSGVGRAFYVNQVRFLDPITNSTASFSCKFSFSILSSSSCPSSDGIAFLISSTTDFTTLSQGYIGLPSPPPLFTQDSSSSSSSSSSSFAVEFDTSVDNSLGDINDNHIGIDVNSVVSFATVDAISHGIDLKSGRVITAWIEYRDAIKMVRVWVSYSYSTRPSTPILASNVDLSDKFNEFMHVGFSASNGQGSSFHIVDHWQFKTFGYDSHSVSPMDMVEEGDCLLCYPGNSFTETQHNDSHSHGHRKKKNEEIALGLGGLAAFSVSAFAIVVVICVFLTKKKGKGVVGVRQIREGQSCRFQTNKVPTRLSLSEIRSATMGFNRDRLVGQGASAKVYKGSLPFGDVAVKRFERDDLKDSTLHNPFATEFATMVGCLRHKNLVQLKGWCCEGNELVLVYEFMPNGSLNEVLHGKYDDSSFALSWKQRVKIVLGVASALTYLHEECERQIIHRDVKTCNIMLDANFNSKLSDFGLAEVYEHSSYKTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVVDYVWKLWEKKELIEGADPTLMGKFDVLEMERMLLVGLLCVHPDYEKRPTVRDAARILKKEAPIPLVPSSKPRVRIRPNCPNDTPETQTVVGDWASTDEGLYLTPRSEFY* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1832 705 Gene3D Transferase(Phosphotransferase) domain 1 459 658 - -
Lan4g1832 705 ProSitePatterns Protein kinases ATP-binding region signature. 386 407 IPR017441 GO:0005524
Lan4g1832 705 SMART serkin_6 380 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1832 705 Pfam Protein kinase domain 381 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1832 705 ProSiteProfiles Protein kinase domain profile. 380 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1832 705 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 264 IPR013320 -
Lan4g1832 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Lan4g1832 705 PANTHER - 27 671 - -
Lan4g1832 705 Pfam Legume lectin domain 20 264 IPR001220 GO:0030246
Lan4g1832 705 Gene3D - 16 276 - -
Lan4g1832 705 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 27 671 - -
Lan4g1832 705 CDD lectin_legume_LecRK_Arcelin_ConA 30 265 IPR001220 GO:0030246
Lan4g1832 705 CDD STKc_IRAK 386 655 - -
Lan4g1832 705 Gene3D Phosphorylase Kinase; domain 1 358 458 - -
Lan4g1832 705 SUPERFAMILY Protein kinase-like (PK-like) 360 653 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1832 Lan-Chr4 26875158 26878458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1832 2 704 Receptor kinase-like Gene Family AT5G42120 51.456 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan4g1832 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1832 - - lang:109346768 1337.01