Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1829 ATGGGGAAGAAGAAGCCCACGGCCCGCGGCCACGACGACAACCCGCCTGCGCCATCTCAGGGCGGCGGCGGTAAATCTAAGAAGAAGGTTGTCATCGATGACGATGAGTATGCTATTGCACCTGAGCTCTCTGAGGAGGCAAAGGTTTTGGAAGAGAAGCATGTTGGGAAGAAGAAAGGTAAGAAAGGTAATGCTAAAGTTGCTAAGGATGATGATGATGATGATGATGATTATGTTATAGTTGGTGATGATGATAATGATGATGTGCCTGAAGTTGTGTTTGCTGGGAAGAAGAAGAAGGGTAAATCGAAAAATGGTGGTGGTGCTGTGGGGAGTTTGTTTGCTGCATCGGCTTTTGATTTACTTGGTGAAGAGGAGGGTGGTGATGATGATGGCGGTAGTGGAGAGAAATCTGAGGAGGATGAACCTGTGGTTAGTTTTACGGGTAAGAAGAAACCCTCCAAGGGATCAAAGAAAAGTGCTAGTAATTTGTTCTCGGCTTTTGATGCTATTGAGGATGAGAATGATGGTGAGGTTGATGATGGTAGGGATGAGAATGATGAGGTTGATGAACCCGTTATTGCTTTTACGGGGAAGAAGAAATCTTCAAAAGGAAGCAAAAAGGGTGGTCCTTTGTTTTCCGCTGCTGGTTTTGTTGAGAATGATGACGAGCAGGATGGTAAGAATGAGAAGGACGATGATGATGATGAAGACATAGGACCAACCACTTTCTCAGGTAAGAAGAAGTCATCAAAATCTTCTAAGAAGGCTGTAAATTCACTTGAGGATATTGTTTCTGTTCCCGAGTCAGATAAAATTGGTGATGAAAAAGATGAGGAGGATGTTTCTTTAGTTGCATTTTCAGGTAAAAAGAAGTCTTCTAAAAAGAAAAGCAGTAGTGCTACTACCAAAGTGAGTGATGAAATTGGGTCTGTGAGTGAAAAAGTGGCTGTAGCCGAGCCTGAGCAACCTAGTATTGGAATTAGTAATAAGAGTGAAGGGGTCACTGAAACATCCAAAAATAAGAAGAAAAAGAATAAGAAGAGTGGAAGAACTGCACAAGAGGAGGACGATTTGGACAAGATTCTTGCAGAACTTGGTGAGGCCCCTCCTGTAGCAAAACCGGTTTCTCCTCCACCACAGGATGATAAAGTTCAGCCTCCTCCTGAAGTAGGTTCTGCTGCTGATCCTTCAGGTGAGAAGGAGGGGGATGAGGAGACAGTGGAGACAGCTGCTGCTAAGAAGAAGAAAAAGAAGAAGGAAAAGGAGAAGGAGAAGAAGGCAGCAGCAGCAGCTGCGGTGGCTGGAAGTGCACCAGAAGAAGTTCAAACTGAGACAATTGAGCCAAAGAAGAAAGATTCGAAGACTAAAGTGGCTGACAAGAAAGTGCCAAAGCATGTCAGAGAGATGCAAGAGGCACTTGCTCGAAGGCAAGAGGCTGAAGAGAGGAAGAGAAGAGAAGAGGAGGAGAAGTTAAGGAAGGAAGAAGAGGAGAGGATAAGGAAGGAAGAAGAGGAGAGACAGGCAGAAGAGGCTAGACGCAGAAAGAAGGAAAGAGAAAAAGAAAAACTCCTGAAAAAGAAGCAGGAAGGTAAACTATTGACTGGTAAACAGAAGGAAGAAGCTCGCCGTTTGGAGGCAATGAGGAAGCAGTTTCTTAATAGCACAGGGAGTGTGACACTTCCTGCTGGGGAATCTGCCCCAACATCCAAAAGACCCATATACAAGTCAAAGAAGTCAAAACCAAACCATCAAAATCAGAATGGTGCTGCTGCTGCTGCTGTTGAGACAGCTGAAAGTGCTGAAACAAAGGGAAATCAGGAGACTACCATTGATATGGGTTCAGAGGAACCAGAAAAGGTTGAAGAAGTGGAGTCGGTACTGGCGGAGGACAAAGTTGAACTTTCTAAACCAATTGAAGAGGACGCAGCAGCAGAAGAAGAGGAAGATGATGAGTGGGATGCAAAAAGCTGGGATGATGTTAATCTAAATGCCAAAGGCGCATTTGCTGATGAAGAGGCTGACTCAGAGCCTGAACCTATAGTCAAGAAGGAGCTAAAAAGTGCTGGTGCTACAAAGAAAACTGTTTCTAATCCCGTGGCTGAAGAAATTGAAGATAGAAAACTGGCTAACGTTGTGGTTGTGGAAAAAACTAAAAAGCATGATCTGGACTCTAGAAGGGAACCACCAAACTCCGTCGTTCTTCCTAAGGCGGGTGAAGAGAACCTGCGCTCTCCAATTTGCTGTATCATGGGGCATGTTGACACTGGCAAAACCAAGTTGCTGGATTGTATTCGAGGTACTAATGTCCAGGAGGGTGAGGCTGGTGGTATCACACAGCAGATTGGTGCGACATTCTTTCCTGCTGAGAACATACGTGAAAGAACAAAAGAGTTGAAAGCTGATGCAAAGCTGAAAGTTCCCGGTCTACTGGTTATTGATACGCCAGGGCACGAATCGTTTACTAACTTAAGGTCTCGGGGTTCTGGTCTATGTGATATTGCAATTTTGGTCGTTGACATTATGCATGGCTTGGAGCCACAAACAATAGAATCACTCAATCTATTAAAAATGAGGAACACAGAATTCATCATTGCCTTAAATAAGGTTGACAGACTTTATGGATGGAAAACATGCCGCAATTCTCCAATTGTTAAAGCAATGAAGCAGCAGACTAAGGACGTTCAAAATGAGTTCAATATGAGGCTTACTCAGATTATTACACAATTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAACAAAGAAATGGGTGAAACATTCAGTATTGTACCTACTAGTGCAATAAGCGGTGAAGGAATCCCTGATATGCTATTACTGTTGGTTAATTGGACCCAAAAAACAATGGTTGAGAAACTTACATATAGTGATGAAGTGCAGTGTACTGTTTTGGAGGTCAAGGTTGTTGAAGGTCATGGAACCACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTCTGTGGAATGCAGAGTCCAATTGTCACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTCCGTGTTAAGGGTACATATATCCATCATAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACAGCCCAGGGGCTTGAAAATGCTATTGCTGGCACTGCGTTATATGTTGTGAAGCCTGGTGATGACGTGGAAAAATTTATAGAAGCTGCTGAGGAAGATATGAATTCAGTCATGAGCAGGATTGATAGGAGTGGTGAGGGAGTTTGTGTTCAGGCATCTACACTTGGTTCCTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGCATAAGCATAGGCCCTGTACATAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGATGAACTGGGTGTGAAAGTTTTTATCGCTGATATCATTTATCATCTCTTTGATCAATTTAAGGCATATATTGACAACATTAAGGAGGAGAAAAAGAGAGAAGCTGCTGACGAGGCAGTATTCCCATGTGTTCTGAGAACTTTACCAAATTGCGTTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTGAAGATCGGGACACCAATTTGTATTCCGTCCAGAGAGTTCATTGATATTGGTCGCATTGCCTCTATCGAGAATAACCATAAACCTGTTGATTTTGCTAAAAAGGGGCAGAAAGTAGCAATAAAGATTGTTGGCAGTAATTCAGAAGAGCAACAAAAAATGTTTGGGAGACATTTTGAGATAGATGATGAACTTGTAAGCCATATTTCACGGAGTTCTATTGATGTTCTCAAAGCTAATTATCGGGATGATCTTTCCACTGAGGAATGGAGACTAGTTGTGAAATTGAAGGCTGTTTTCAAGATACAATGA 4008 0.4244 MGKKKPTARGHDDNPPAPSQGGGGKSKKKVVIDDDEYAIAPELSEEAKVLEEKHVGKKKGKKGNAKVAKDDDDDDDDYVIVGDDDNDDVPEVVFAGKKKKGKSKNGGGAVGSLFAASAFDLLGEEEGGDDDGGSGEKSEEDEPVVSFTGKKKPSKGSKKSASNLFSAFDAIEDENDGEVDDGRDENDEVDEPVIAFTGKKKSSKGSKKGGPLFSAAGFVENDDEQDGKNEKDDDDDEDIGPTTFSGKKKSSKSSKKAVNSLEDIVSVPESDKIGDEKDEEDVSLVAFSGKKKSSKKKSSSATTKVSDEIGSVSEKVAVAEPEQPSIGISNKSEGVTETSKNKKKKNKKSGRTAQEEDDLDKILAELGEAPPVAKPVSPPPQDDKVQPPPEVGSAADPSGEKEGDEETVETAAAKKKKKKKEKEKEKKAAAAAAVAGSAPEEVQTETIEPKKKDSKTKVADKKVPKHVREMQEALARRQEAEERKRREEEEKLRKEEEERIRKEEEERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRKQFLNSTGSVTLPAGESAPTSKRPIYKSKKSKPNHQNQNGAAAAAVETAESAETKGNQETTIDMGSEEPEKVEEVESVLAEDKVELSKPIEEDAAAEEEEDDEWDAKSWDDVNLNAKGAFADEEADSEPEPIVKKELKSAGATKKTVSNPVAEEIEDRKLANVVVVEKTKKHDLDSRREPPNSVVLPKAGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATFFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIIALNKVDRLYGWKTCRNSPIVKAMKQQTKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVNWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQSPIVTTIRALLTPHPMKELRVKGTYIHHKEIKAAMGIKITAQGLENAIAGTALYVVKPGDDVEKFIEAAEEDMNSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADELGVKVFIADIIYHLFDQFKAYIDNIKEEKKREAADEAVFPCVLRTLPNCVFNKKDPIVLGVDILEGILKIGTPICIPSREFIDIGRIASIENNHKPVDFAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRSSIDVLKANYRDDLSTEEWRLVVKLKAVFKIQ* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1829 1335 MobiDBLite consensus disorder prediction 641 656 - -
Lan4g1829 1335 Gene3D - 737 965 IPR027417 -
Lan4g1829 1335 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1335 - -
Lan4g1829 1335 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1335 IPR015760 -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 613 640 - -
Lan4g1829 1335 Pfam Elongation factor Tu domain 2 982 1060 IPR004161 GO:0005525
Lan4g1829 1335 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1068 1197 IPR036925 -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 444 548 - -
Lan4g1829 1335 CDD aeIF5B_II 967 1077 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 1 33 - -
Lan4g1829 1335 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 743 959 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 CDD IF2_aeIF5B_IV 1206 1301 - -
Lan4g1829 1335 Gene3D Translation factors 1198 1335 - -
Lan4g1829 1335 PRINTS GTP-binding elongation factor signature 747 760 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 PRINTS GTP-binding elongation factor signature 811 821 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 PRINTS GTP-binding elongation factor signature 827 838 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 PRINTS GTP-binding elongation factor signature 863 872 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 MobiDBLite consensus disorder prediction 121 658 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 397 416 - -
Lan4g1829 1335 Pfam Translation-initiation factor 2 1073 1184 IPR023115 -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 349 364 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 171 188 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 50 89 - -
Lan4g1829 1335 Coils Coil 405 433 - -
Lan4g1829 1335 TIGRFAM small_GTP: small GTP-binding protein domain 748 874 IPR005225 GO:0005525
Lan4g1829 1335 MobiDBLite consensus disorder prediction 50 69 - -
Lan4g1829 1335 Gene3D Translation factors 966 1086 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 268 286 - -
Lan4g1829 1335 CDD IF2_eIF5B 746 956 - -
Lan4g1829 1335 SUPERFAMILY Translation proteins 1202 1334 IPR009000 -
Lan4g1829 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 1034 IPR027417 -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 123 137 - -
Lan4g1829 1335 Pfam Elongation factor Tu GTP binding domain 747 954 IPR000795 GO:0003924|GO:0005525
Lan4g1829 1335 Coils Coil 463 529 - -
Lan4g1829 1335 Gene3D - 1087 1191 IPR036925 -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 551 565 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 372 386 - -
Lan4g1829 1335 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1829 Lan-Chr4 26843396 26851203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1829 350 1335 Eukaryotic Initiation Factors Gene Family AT1G76810 69.003 0.0 1194