Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1826 ATGGAAGGAAAATTGTCACAGGGAGGTATAATTCAAGGTGGAACATCTTTCGGTGGCTTTGGTTTGCAAGGACCAATTCAGATTCCTCACCAAGCACAACATCCTCATACTACACACCGGCATCAAACTCTTCGGTGTCAAGGGTCTTCCGTACATTCCTCAGTTCGTGATGTCTTTCATCTTACAACGGGAACCTTACAGAACTGCGATCACACTATTCCGAGCGAAGAAGACGAGCCGAGCTTTACTGAGGATGGTTTTGACGGTCACCATGAATCAGGTAGAGGGAAAAAGGGATTACCTTGGCAGCGTGTGAAGTGGACCGACAAAATGGTGAAGCTTCTGATTACGGCTGTTTCTTATATTGACGAGGATGGAAGTTCTGATGGAAACGGCAGTGGAAGAAGAAAGTTTGTGTTTCTACAGAAAAAAGGCAAGTGGAAATCTATTGCAAAAGTCATGGCCGAAAGGGGATATCATGTTTCACCTCAGCAGTGTGAGGACAAGTTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTTGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCACTGTTGGATTTAATAGATTATCTTTCCGAGAAAGAAAAGGACGATGTTCGCAAAATATTAAGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCCTATCATAATAGTAATAGATTGCATTTGCCCCATGATCCTGCATTACAACATTCGCTACAGTTAGCACTCCGAAATAGAGATGATCATGATAACGATGATACAATAAGGTCCCACCATGACGACCATGATGAAGATGATCAAGACGATGAAGTTGATGGTCACGATGACTTTGAAGAGAGTTATGCTTCTCATGGAGACAGTAGAGGAAGATATGGGCCATTAGAGGGGTCTATGAAGAAGAAATTGAAACAATGCCAAGGCCATGAAAATGCGTCTACTTTTGTTAATCCCTTAAGCTGTCAGGACCACAACAAACGCGCATATGCCGATGGACAGATAGTCCAATCAGGTACGAATGAAGTTTTACCTGAAGGCATGGGAGCAGCTTGGTCACAGAAGCAACGGTTTGAATCTCGCTCACTTCAGTTAGAAGAACAGAAGCTACAACTTCAGTCTGAGATGTTGGAACTAGAGAAGCAGAGACTCAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCAGGAGCTGGAGAAGCTAAGTTTGGAAAATGAACGGATGCGGCTCGAAAATGAACACATTGCTTTAGAACTGAAGCAAAAGGAAATGGGTGGCTTTAACTAG 1305 0.4276 MEGKLSQGGIIQGGTSFGGFGLQGPIQIPHQAQHPHTTHRHQTLRCQGSSVHSSVRDVFHLTTGTLQNCDHTIPSEEDEPSFTEDGFDGHHESGRGKKGLPWQRVKWTDKMVKLLITAVSYIDEDGSSDGNGSGRRKFVFLQKKGKWKSIAKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDLIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNSNRLHLPHDPALQHSLQLALRNRDDHDNDDTIRSHHDDHDEDDQDDEVDGHDDFEESYASHGDSRGRYGPLEGSMKKKLKQCQGHENASTFVNPLSCQDHNKRAYADGQIVQSGTNEVLPEGMGAAWSQKQRFESRSLQLEEQKLQLQSEMLELEKQRLKWQRFSKKKDQELEKLSLENERMRLENEHIALELKQKEMGGFN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1826 434 PANTHER FACTOR, PUTATIVE-RELATED 1 431 - -
Lan4g1826 434 Coils Coil 362 394 - -
Lan4g1826 434 Pfam Myb/SANT-like DNA-binding domain 104 230 IPR044822 -
Lan4g1826 434 MobiDBLite consensus disorder prediction 72 98 - -
Lan4g1826 434 Coils Coil 397 426 - -
Lan4g1826 434 MobiDBLite consensus disorder prediction 70 98 - -
Lan4g1826 434 MobiDBLite consensus disorder prediction 1 47 - -
Lan4g1826 434 MobiDBLite consensus disorder prediction 256 313 - -
Lan4g1826 434 MobiDBLite consensus disorder prediction 256 272 - -
Lan4g1826 434 PANTHER F16F4.11 PROTEIN-RELATED 1 431 - -
Lan4g1826 434 Gene3D - 107 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1826 Lan-Chr4 26827304 26829565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g1826 Myb_DNA-bind_4 1.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1826 - - gmx:100812134 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0766 8 9829983 9832294 Lan4g1826 4 26827304 26829565 LSH
Lan7g1008 7 10158149 10161631 Lan4g1826 4 26827304 26829565 PCT
Lan8g1208 8 17839490 17842977 Lan4g1826 4 26827304 26829565 PCT
Lan4g1826 4 26827304 26829565 Lan7g1008 7 10158149 10161631 PCT
Lan4g1826 4 26827304 26829565 Lan8g1208 8 17839490 17842977 PCT