Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1825 ATGTTGGGTGAGTCATCAAGTGGAGAGGCGGTGGCAGTAGGTGGTGGTGGTGGTGGAGGAGTGGTGGTAGGTGGTGGTGGTGGTGGAGGAGGAGGAGGTTCAACTTCTGGGGATGAAGATAGAAGAATGGAAGAAGGAGAACGTGGTAGCTTCGGTGGGAACCGGTGGCCAAGACAAGAGACTTTGGCGTTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGGTCCCTTGTGGGAACAAGTTTCCAGGAAGCTTGCAGAGATTGGGTATCACAGAAACGCTAAGAAATGCAAAGAGAAATTTGAGAATGTATACAAGTATCACAAGAGAACCAAAGAAGGTCGAAGTGGTAAATCTGAAGGCAAAACTTATCGATTTTTTGATCAATTAGAAGCCCTTGATCATCTTCATCATCCTTCAACAACTCCCTCCCCTAACCCACCATTACCATCGATTGCACCATCACCATTATCATCAATAGTAGCGACAACAACAGTAACAGTACCTATGCCACAAGTGGTTAACAACACCACTCATAGTTGTGTCCCTCATTTTACTGTTCCATCAACAACTACTGGTGCTACAACAGTACAATCTTTGACCATGAATCAAGGCATTGTTGTCACTACTACCCCATCAATAAGCCTTCCAAATATACCTTCTTATCCACATACAAACCCTACAATCTTCCCTACACCACACCCATTACCACCACAAGCAGCAACAACAACAAACCCTACCACCATACCAATCTCTTTCCCCAACATCCCAAACGATCTCTTGTCCAACTCTTCCTCGTCGACTTCTTCTGATGATGAAATGTTTGAGGAGAGGCGCAAGCGAAAGCGGAAGCGCAAGTGGGAGGACTTCTTCCATAGACTAATGAAGGGAGTAGTGAAGAAGCAAGAGGAACAGCAAAGGACATTCTTGGAAGCTATAGAGAAACGCGAGCACGAGCTAATGGCGAGAGAAGAAGCATGGAGAGTGCAAGAGATGCAAAGGATAAATAGGGAGAGGGAAATTTTAGCTCAAGAAAGATCAGTAGCTGCTGCCAAAGATGCTGCCGTTATGGCATTCTTGCAGAAGATAGCTGAACAACAACATAGTGGAGAAGCGTTGAACACCATCAATATTCCAACACAACCACAGCCACAACCAGTTGCGCCACAAACACTAGTGCCAGCTATTGTTCCTACACTGGTGCAACCGCAAGTACAATCACAACAACCACAGCTACAATTAGTTGTTCAGCCCAGCCCACCAATACAACCTGTTGTGGTGCCACCGGTCCCACCGCAACAACAACAACAACAGCAACTAGTGATGAATATGGAAATAGTGAGAGCTGATAATAATGGAGAGAACATGATGGGAGCAAGCTCATCAAGGTGGCCAAAAGTAGAGGTTGAAGCATTGATAAAGCTGAGAACTGAGCTTGACGCGAAGTACCAAGAGAACGTACCAAAAGGGCCACTTTGGGAAGAGATATCATCCTCAATGAGGAAGCTGGGGTACAATAGAAATGCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGAAGAGACCACAAGATTCCAAAACATGTCCATATTTTCATCAGCTTGATGCACTTTATAGAGAGAAGAACAAAATGGTGCAGCCAGAGAGCATGGTGGCGCCGCTGATGGTGCAACCGGAGCAGCAATGGCCTCCTCAGCAGCATAGGGAAGAAGAGGACGGCGATGATGATGATTTTGATGAAGAAGAGAAAGATAATGGAGAGGAAGAAGAAGAAGATGAAGAGAATGGAAGTGGTAGTAGTGGTGGTAAGTATGAGGTAGTGGCAAATAAGGTTCCTTCAGCATCAGTGGGTGGTGCTTCAGGTGAATAG 1926 0.4564 MLGESSSGEAVAVGGGGGGGVVVGGGGGGGGGGSTSGDEDRRMEEGERGSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEQVSRKLAEIGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLEALDHLHHPSTTPSPNPPLPSIAPSPLSSIVATTTVTVPMPQVVNNTTHSCVPHFTVPSTTTGATTVQSLTMNQGIVVTTTPSISLPNIPSYPHTNPTIFPTPHPLPPQAATTTNPTTIPISFPNIPNDLLSNSSSSTSSDDEMFEERRKRKRKRKWEDFFHRLMKGVVKKQEEQQRTFLEAIEKREHELMAREEAWRVQEMQRINREREILAQERSVAAAKDAAVMAFLQKIAEQQHSGEALNTINIPTQPQPQPVAPQTLVPAIVPTLVQPQVQSQQPQLQLVVQPSPPIQPVVVPPVPPQQQQQQQLVMNMEIVRADNNGENMMGASSSRWPKVEVEALIKLRTELDAKYQENVPKGPLWEEISSSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPQDSKTCPYFHQLDALYREKNKMVQPESMVAPLMVQPEQQWPPQQHREEEDGDDDDFDEEEKDNGEEEEEDEENGSGSSGGKYEVVANKVPSASVGGASGE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1825 641 MobiDBLite consensus disorder prediction 261 277 - -
Lan4g1825 641 MobiDBLite consensus disorder prediction 37 51 - -
Lan4g1825 641 MobiDBLite consensus disorder prediction 261 289 - -
Lan4g1825 641 SMART sant 467 529 IPR001005 -
Lan4g1825 641 SMART sant 52 114 IPR001005 -
Lan4g1825 641 PANTHER - 29 629 - -
Lan4g1825 641 MobiDBLite consensus disorder prediction 1 55 - -
Lan4g1825 641 ProSiteProfiles Myb-like domain profile. 48 112 IPR001005 -
Lan4g1825 641 Pfam Myb/SANT-like DNA-binding domain 54 140 IPR044822 -
Lan4g1825 641 Pfam Myb/SANT-like DNA-binding domain 469 556 IPR044822 -
Lan4g1825 641 Gene3D - 471 532 - -
Lan4g1825 641 Gene3D - 56 117 - -
Lan4g1825 641 CDD GT1 54 119 - -
Lan4g1825 641 ProSiteProfiles Myb-like domain profile. 469 527 IPR001005 -
Lan4g1825 641 MobiDBLite consensus disorder prediction 575 641 - -
Lan4g1825 641 CDD GT1 469 534 - -
Lan4g1825 641 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 29 629 - -
Lan4g1825 641 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1825 Lan-Chr4 26811787 26814976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1825 46 580 Trihelix Transcription Factor Family AT1G76890 44.727 8.58e-139 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g1825 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1825 - - lang:109353888 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0765 8 9813500 9818901 Lan4g1825 4 26811787 26814976 LSH