Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1801 ATGGGTGCAGCTTCAGAATTTGATTCCACTGAGTGTTTGAGCAAAACGATGTCGTCGATGCCTGGTTTTCGTTTCCATCCTACAGATGAGGAACTTGTTATGTACTATCTTAAGAGGAAGATTTGTGGGAAAAAGCTGAAGCTTGATGTGATTCACGAAACTGATGTGTACAAGTGTGATCCTGAAGAATTACCTGGGCTTTCTGTACTCAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCATAGAGACAGGAAGTATCCTAATGGTGCAAGGTCTAACCGAGGAACTAGACACGGGTACTGGAAAGCAACAGGAAAGGATCGTAACATTACCTCCAATAATCGAGCAGTTGGAGTGAAAAAGACACTTGTTTTCTATAGAGGAAGAGCACCTAATGGTGAGCGGACTGATTGGGTTATGCATGAATACACCATGGACGAAGAAGAGCTTAGGAGATGCCAGGGTGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAATATGGTGCTCCATTTAAAGAAGAAGAGTGGGTAGATGACGATGTTGTAGATTTTAGCATTAACACAGCTGATTGTGAGGTTCCAATTCCCGATACTGTCATTGATGACAATGATCAGCTGCAGCCTTTGTTAGATGATGAGATTGTGGACTTTATTTATGGAATGTTGGATGACGAGCAACATGTGAATGCTGGCTTTCCTCTGGTTGTTGATGAACAAAGACAAAGTACTGTGGTGGATCAATTATCTGATGCTGTGATATTTCCTGAGCCAAGTGGTATCTTTCAATCAAATGGTCAGCACCATGATTTGCTGCCCAGCTTTGACTTCGATCAATCTGCAGTTACTTCTCAGCTGCATGTTTCTGATGCACTTGAGGTCACTTCTGCTCCCAACATTGAAATTGAAGAGTTCCACTTTTGTGAGGAAGACTTCTTGGAAATTAATGATCTCCTCATTGGTACTGAACCTACACAGTCAAATGCCGAAAACCCTGTGGAGAACCTGCAGTTCGAAGATGGGTTAAGTGAATTTGATCTATATGCAGATATGTTTCTTGAGTTGGGGACAACCACTCAGGAAACTGTTTCCTGTGCATCTATGAATTCCCCTGAAGGCATTGTTGTTAGTCAAAATTATCAGTGGCAGTCCAATCCAGAGAATGCAAATATAACTGGTGCTGAATTTTGGATGCAAGATGAAAGAAATATCCCGAGTGGAGCTGACAGCTTTGTTGATTCTTTCTCTCTACCAACCACAGGTGTTGTATATGAATCTGCCAGTTTTCCGACAGAAGGCAATGATAATCAAAATAGCACAGGGAAAGACGTTGCTACAAGTAGATTCTCCTCTGCTCTATGGGCATTTGTTGAGTCAATACCTACCACTCCTGCATCAGCCGCCGACAATGCTTTGGTGAACCGGGCATTGAATCGAATGTCTAGCTTCAGCAGCAGGGTTAAGATTAATAACAAACACACAAATATTGCAGCAGCAGCAACATCAGGAAGAGATAAAGACACTGCAACTGTAAAGAGAGCAAGCAGAAAGGGGGTTTCATTCCTTTTCTTCCCAATTATTATTGCTCTATGTGCTTGCTTGTGGGTTTCTATTGGAACTTTAAGAGTATATTAG 1671 0.4171 MGAASEFDSTECLSKTMSSMPGFRFHPTDEELVMYYLKRKICGKKLKLDVIHETDVYKCDPEELPGLSVLKTGDRQWFFFCHRDRKYPNGARSNRGTRHGYWKATGKDRNITSNNRAVGVKKTLVFYRGRAPNGERTDWVMHEYTMDEEELRRCQGVKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWVDDDVVDFSINTADCEVPIPDTVIDDNDQLQPLLDDEIVDFIYGMLDDEQHVNAGFPLVVDEQRQSTVVDQLSDAVIFPEPSGIFQSNGQHHDLLPSFDFDQSAVTSQLHVSDALEVTSAPNIEIEEFHFCEEDFLEINDLLIGTEPTQSNAENPVENLQFEDGLSEFDLYADMFLELGTTTQETVSCASMNSPEGIVVSQNYQWQSNPENANITGAEFWMQDERNIPSGADSFVDSFSLPTTGVVYESASFPTEGNDNQNSTGKDVATSRFSSALWAFVESIPTTPASAADNALVNRALNRMSSFSSRVKINNKHTNIAAAATSGRDKDTATVKRASRKGVSFLFFPIIIALCACLWVSIGTLRVY* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1801 556 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Lan4g1801 556 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Lan4g1801 556 PANTHER NAC TRANSCRIPTION FACTORS 2 18 555 - -
Lan4g1801 556 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Lan4g1801 556 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Lan4g1801 556 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1801 Lan-Chr4 26638437 26642356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1801 12 555 NAC Transcription Factor Family AT1G34190 43.664 2.23e-138 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan4g1801 NAM 2.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0746 8 9685146 9689183 Lan4g1801 4 26638437 26642356 LSH