Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1793 ATGGAGCCTCTCTCCAAAAACAATACTAACAACAACCTTGTTAAGCCTTCTCTTAATGTTGAGACTTTGGACCCTATTGAGCCAAGTCCTCTACGTAAGATCATTGTTGTTGCTTCCATAGCTGCTGGTGTTCAATTCGGTTGGGCACTTCAACTTTCTCTGCTCACTCCTTATGTGCAGTTACTTGGTATACCTCATAAATGGGCCTCCTTCATATGGCTCTGTGGCCCCATCTCCGGCATGCTTGTTCAGCCTATCGTCGGCTACCATTCCGATCGTTGCACCTCTCGATTTGGTCGCCGTCGTCCTTTCATCGCTGCCGGTGCACTTGCCGTTGCTGTTGCCGTTTTCCTTATAGGTTACGCTGCTGATCTCGGTCACGCTACCGGTGATAACTTGGCCAAGCAATCCCGGCCACGCGCTATAGCCATCTTTGTCGTTGGATTCTGGATCCTCGATGTGGCGAATAATATGCTGCAGGGACCTTGCCGAGCACTCCTTGCTGACCTATCTGCCGGAGATCACCGGAAAACGAGAAACGCAAACGCGTTCTTCTCGTTCTTTATGGCTGTCGGAAACGTTCTTGGCTATGCCGCCGGTTCATTCAGTGGCCTCCACAGAATGTTCCCGTTCACCATGACGAAAGCATGCGACATTTACTGCGCCAATCTGAAAAGCTGCTTCTTCCTCTCCATCATTCTCCTTCTCACACTCACAACCGCGGCGTTGATCTACGTGAAGGAGAGAGCCCTTGTTCCTGATCAGAAAAACCCTAACGTGAAGGAAGACGGTGGGATACAATGTTTCGGAGAATTATTCGGTGCATTTCATGAACTGAAGCGTCCCATGTGGATTCTATTATTGGTGACATGTCTTAATTGGATTGCATGGTTTCCTTTCTTATTATTCGACACTGATTGGATGGGTAAAGAGATATACGGTGGGAAAGTCGGGAATGGGAAGGCTTCAAAGTCATACGATATGGGAGTCCATGCCGGAGCATTAGGGCTCATGTTAAACTCAATTGTTCTAGGTGTGACATCACTTGGGGTTGAGTTTTTGGCGCGTGTAGTTGGGGGCGTGAAGAGGTTGTGGGGGATTGTTAATTTCTTACTTGCGATTTCCTTGGCCATGACGGTGTTGGTTACTAAAATGGCGGAGCATTCACGGCAGTTCCCCGGCGGTGATGTAAACGCTGATCCTCTTCCACCTACCGGTGCTATCAAAGCTGGCGCGTTGACTCTTTTCTCAGTTCTGGGTATCCCTCTAGCGATTACTTACAGCATACCCTTTGCTCTGGCATCTATTTTCTCCATCACTTCTGGTGCTGGCCAAGGGTTATCTCTTGGAGTTCTCAATCTTGCTATTGTCATACCACAGATGATTGTATCAGTGCTTAGTGGACCATGGGATGCTGCTTTTGGTGGTGGTAACTTGCCAGCTTTCGTGGTGGGTGCGGTGGCGGCCGCAGCCAGTGGCATATTATCCATAGTCCTACTACCATCTCCACCACCGGAATTAGCCAAGGCTGCAACTGCTACAGGAGGAGGGTTCCATTAA 1560 0.491 MEPLSKNNTNNNLVKPSLNVETLDPIEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWASFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAVAVFLIGYAADLGHATGDNLAKQSRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANAFFSFFMAVGNVLGYAAGSFSGLHRMFPFTMTKACDIYCANLKSCFFLSIILLLTLTTAALIYVKERALVPDQKNPNVKEDGGIQCFGELFGAFHELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEIYGGKVGNGKASKSYDMGVHAGALGLMLNSIVLGVTSLGVEFLARVVGGVKRLWGIVNFLLAISLAMTVLVTKMAEHSRQFPGGDVNADPLPPTGAIKAGALTLFSVLGIPLAITYSIPFALASIFSITSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDAAFGGGNLPAFVVGAVAAAASGILSIVLLPSPPPELAKAATATGGGFH* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1793 519 Pfam MFS/sugar transport protein 42 296 - -
Lan4g1793 519 Gene3D MFS general substrate transporter like domains 31 251 IPR036259 -
Lan4g1793 519 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 17 510 - -
Lan4g1793 519 SUPERFAMILY MFS general substrate transporter 32 504 IPR036259 -
Lan4g1793 519 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 504 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lan4g1793 519 PANTHER SUGAR TRANSPORTER 17 510 - -
Lan4g1793 519 CDD MFS_SLC45_SUC 34 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1793 Lan-Chr4 26562947 26566399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1793 1 519 Sucrose Transporter Gene Family AT1G71890 67.754 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1793 K15378 - gmx:547679 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0742 8 9641183 9644166 Lan4g1793 4 26562947 26566399 LSH
Lan20g0111 20 668817 671340 Lan4g1793 4 26562947 26566399 LSH
Lan4g1793 4 26562947 26566399 Lan7g1038 7 11029855 11032584 PCT