Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1787 ATGGGAATTTCTTCACACCCTTCCTTTGTTTCCTTCTCTTTGAAAGATCTGCATCAGAGAGCTGAAGATGAAAGAAACTCATCATCATATGGGTATTTGTGTAGCAAAGTGGTGGCAGCCCAAGCCAAGAAACAGAAAGTGATGAAGAAAAGTATCAAAGGTAAGAGACCTATAAGAATTTTAATGAAGAGAAGGGGTGGTTATAGAAGAAGATTAGTCAATGGGATTCAGAAAAGGGTCAGAACATTGAAGAGGCTTGTACCAAACAGTGACTCAATGGGATTAGATGGACTGTTCAGAGAAACAGCTGATTATATATTGGCTCTACAAACAAGAGTGGAAGTCATGCAGGTTATGGTTAATGTATTGACATGA 375 0.3867 MGISSHPSFVSFSLKDLHQRAEDERNSSSYGYLCSKVVAAQAKKQKVMKKSIKGKRPIRILMKRRGGYRRRLVNGIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVEVMQVMVNVLT* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1787 124 PANTHER TRANSCRIPTION FACTOR UPBEAT1 12 124 - -
Lan4g1787 124 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 124 IPR044660 GO:0006355
Lan4g1787 124 CDD bHLH_AtIBH1_like 65 120 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1787 Lan-Chr4 26532832 26533281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1787 70 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 66.071 1.04e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1787 - - gmx:100794627 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0117 20 708033 708607 Lan4g1787 4 26532832 26533281 LSH