Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1780 ATGGGGACTCTAAAGTTCTCATCTTTGTCACTCACTCATTCTTCTCCACTCTCTGATATTACAGGGATGCTGGGGAAACAGTTGAATTTCCCTATGCTTACTATTAATTCTGCAGCACAGTTCTGCTATTGCAAGGCTGATGTTGCTGCCACATCATTGAGTATTCCACTGTCGAATGTTGGATTTTCTAACAGATTTTCACCAAGTGTAGTGAAAGCAACATGGACCTCAACTCTTTCTACCAAACATTGGATATTAAATTCAACCACACAGATAGAAAATATAATCACAAGTGATGAAGATCAGAGTAAGTGGGAAGCATGTAAACAAGCTCTTTCTGCATTTAACTTTAGCGTTGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGCCTTGTTCATTCCCCTTATTGGGGAGAAGAACGTAAGAAGGAAGTTCCCAAATTAGAGGCAGTAAATGGAATATTAGACTATTTGAGGAGTTTAAGTCTTTCTGATAATGATCTGTCCAAGTTGCTCAAAAAGTTTCCAGAAGTTCTTGGATGTAATTTAGAAGAAGAGTTGAAAGGTAATGTAAAGATCCTAGAGGAGCAGTGGAGTATTGAAGGAAAATCTCTTAGGAACCTCATCCTTCGAAATCCAAAAGTTTTGGGTTATAATGTTGATTGTAAGGGAGACTGTATGGCACAATGCACCCGATGCTGGGTTCGGTTCTAG 717 0.3877 MGTLKFSSLSLTHSSPLSDITGMLGKQLNFPMLTINSAAQFCYCKADVAATSLSIPLSNVGFSNRFSPSVVKATWTSTLSTKHWILNSTTQIENIITSDEDQSKWEACKQALSAFNFSVEEKDKILGKAFGLVHSPYWGEERKKEVPKLEAVNGILDYLRSLSLSDNDLSKLLKKFPEVLGCNLEEELKGNVKILEEQWSIEGKSLRNLILRNPKVLGYNVDCKGDCMAQCTRCWVRF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1780 238 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 237 - -
Lan4g1780 238 PANTHER CGI-12 PROTEIN-RELATED 21 237 IPR003690 GO:0003690|GO:0006355
Lan4g1780 238 Pfam mTERF 156 221 IPR003690 GO:0003690|GO:0006355
Lan4g1780 238 Gene3D Transcription termination factor 3, mitochondrial 80 234 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan4g1780 mTERF 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1780 - - gmx:100797265 367.851