Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1778 ATGGAAGATTCAGAAGATGAGCTTCTGAATCTTACCCTTTCAGTTGCTGCTGATAGAGAGAGGAAAAAGAAGGGAAAGATAATAATAAGGGATCATAATAATATTGCTAGTTCTATGAGTACTACTCATAGTATGAACCCTTATGAGGATTGTTATGAAGGGAAGATCTTTAGGCTTCTTCAAGTGAGGGATCAAATGCTAAGACAAGACCATAGGCTATGGAATAAAGGAGTTATTGTTGAAGAGGGTAATGGCCTTCCTTTGCTTCTCACAGCAGCCACTTTAGTTGACAACAACAACTTTGGTTCAGCTTTAGAGAACCTCACTGAACTCTATAAAATTGTTTCCATGAAAGGTGACTCAGTTCAACGTGTAGTTGCTTATTTTTCAGATGGCTTAGTGGCAAGGCTTCTCACTAGAAACTCTCCATTCTATGACATGCTCATGGAGGAACCAACAACTGGGGAAGAGTTTCTTGCATTCACAGATCTCTATAGGGTCTCACCTTACTACCAATTTGCTCATTTCACTGCAAATCAAGCAATTCTGGAAGTGTTTGAGAAAGAAGAAGAGAAAAACAACCGTGCTATTCATGTCATTGATTTTGATGTTTCCTATGGTTTTCAATGGCCTTCTCTTATTCAATCACTTTCTGAGAAAGCAACAAGTGGAAACAGAATATCTCTCAGGATAACTGGATTTGGTAAGAACTTGAAAGAGCTTCAAGAAACTGAGTCTAGGTTGATTAGCTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAATTTCAAGGGTTGCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAGACTGTGGCAGTGAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTCTTAAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCCATTGTTGTGTTGGTGGAACAAGAAGGTAGCAGGAGTCCTAATAGGACCTTCTTGTCAAGGTTCACAGATACTTTGCATTACTTTGCAGCAATGTTTGATTCACTTGATGATTGTCTTCCACTTGAGAGCACTGAAAGATTGAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATCAAAAGTATCCTCAACTATTATGACATTGATGGTGTGGATTGTCCAAAATATGAGAGAATGGAAACATGGAAAACAAGGATGGAGAATCATGGTTTTGGTGGAACCAAAATAAGCTCAAAATCTATAATCCAAGCAAAACTTCTTTTGAAGATGAGGACTCATTATTGTCCACTACAATTTGAGGAAGAGGGTGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAAGCAAAGGCTATATCTTTAGGGTGGCAAAATAGGTTTTTGCTAACTGTCTCAGCATGGAAACCAGTTTGA 1404 0.3882 MEDSEDELLNLTLSVAADRERKKKGKIIIRDHNNIASSMSTTHSMNPYEDCYEGKIFRLLQVRDQMLRQDHRLWNKGVIVEEGNGLPLLLTAATLVDNNNFGSALENLTELYKIVSMKGDSVQRVVAYFSDGLVARLLTRNSPFYDMLMEEPTTGEEFLAFTDLYRVSPYYQFAHFTANQAILEVFEKEEEKNNRAIHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFLKISDTLGFVHSLNPSIVVLVEQEGSRSPNRTFLSRFTDTLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSILNYYDIDGVDCPKYERMETWKTRMENHGFGGTKISSKSIIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEAKAISLGWQNRFLLTVSAWKPV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1778 467 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 465 IPR005202 -
Lan4g1778 467 ProSiteProfiles GRAS family profile. 76 465 IPR005202 -
Lan4g1778 467 Pfam GRAS domain family 88 465 IPR005202 -
Lan4g1778 467 PANTHER OSJNBA0084A10.13 PROTEIN 7 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1778 Lan-Chr4 26481029 26482649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1778 93 466 GRAS Transcription Factor Family AT3G54220 34.465 9.82e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan4g1778 GRAS 3.8e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1778 - - gmx:100809458 752.281