Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1776 ATGTCTGGCAACTCAAATTGTACTGTTTACATTGGCAATCTGGATGAGAGGGTGACAGACAGGGTCTTGTATGACATATTAATTCAGGCAGGACAAGTGGTAGATTTGCACATTCCTAAAGATAAGGAAACAGATAAACCAAAAGGTTTTGCCTTTGCAGAGTATGAAACTGAGGAGGTTGCAGACTATGCTGTCAGGCTGTTCTCAGGCCTTGTGACACTCTACAACAGAACACTGAAGTTTGCGATATCTGGGAAAGACAAAACTACCTCTAATGGTTCTACTGCAATGACACCCACATCAAATTCTTCTCAACGACTAAGGCCTTACTCTATTAGTAACTCAGACAATTTTCCACACTCCACTGGACTATCAACACCTGACCGGTTTTCAGATTATGCTGTGAATCATTCCAAAGTTCCTCCTCTTCATGTGACTGACCAATCTAGTGGGTATAGATCTCACCACAATGCTAACAATTATGAAAACGGTCGGAGAGTTTTTGGTGCAACATTGGATAGCATTACCCAGTCTAGGTCACGCCGCCATTAG 552 0.4239 MSGNSNCTVYIGNLDERVTDRVLYDILIQAGQVVDLHIPKDKETDKPKGFAFAEYETEEVADYAVRLFSGLVTLYNRTLKFAISGKDKTTSNGSTAMTPTSNSSQRLRPYSISNSDNFPHSTGLSTPDRFSDYAVNHSKVPPLHVTDQSSGYRSHHNANNYENGRRVFGATLDSITQSRSRRH* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1776 183 PANTHER OS01G0876500 PROTEIN 1 183 - -
Lan4g1776 183 SUPERFAMILY RNA-binding domain, RBD 4 81 IPR035979 GO:0003676
Lan4g1776 183 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Lan4g1776 183 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Lan4g1776 183 Gene3D - 2 97 IPR012677 -
Lan4g1776 183 MobiDBLite consensus disorder prediction 86 125 - -
Lan4g1776 183 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 183 - -
Lan4g1776 183 SMART rrm1_1 8 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1776 Lan-Chr4 26466053 26469167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1776 8 89 Eukaryotic Initiation Factors Gene Family AT1G49760 30.488 3.06e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1776 K12831 - gmx:100784532 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0125 20 753342 756485 Lan4g1776 4 26466053 26469167 LSH