Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1771 ATGGAATACAAAATGATGATGAAAACCACAACAACAACAACATCACAATCTCCTCCTTCATCAATCCCAATAATAAACCATGTTCCAACATCCATGCTCTCTATTTATTCTAATTCTTCTTCTTCTTCACCTCCTTTACAATCTCATTCTCCCACACCTTTCCCTTCACTTTCACCTTCTCAGTCTTCTCCTCCTACCTCAGCTGCTGTTGCTGCTGCTGCTCCTCCACCACCTCCACCACCGGTTGTGGTGGTTAGCCCTTGTGCTGCCTGTAAGATCCTCCGCCGCAGGTGTGTGGAGAAGTGTGTCTTGGCTCCATATTTCCCTCCAACTGATCCTATCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGTAACATCATCAAGTTGTTGCAGGAACTACCAGAATCACAGAGAGCAGATGCAGTGAGCAGCATGGTATATGAAGCAAATGCTAGACTTAGAGACCCAGTGTATGGGTGTGCAGGTGCAATATGCCAACTTCAAAAGCAAATTAGTGACCTACAAGCACAGCTAGCAAAAGCACAAGCTGAAGTAATCAACATGCAATGCCAACAAGCTAATTTAGTTGCTCTAATTTGCATGGAAATGACTCAATCACAGGACCAGATCAACATGCTTCAGCCTCAACCTAATGATGTTGATATGACTTGTTTCTTTGATGACAACAATTTTGCCTCTGCTTGGGAGCCTCTGTGGACATGTAACTAA 735 0.4395 MEYKMMMKTTTTTTSQSPPSSIPIINHVPTSMLSIYSNSSSSSPPLQSHSPTPFPSLSPSQSSPPTSAAVAAAAPPPPPPPVVVVSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKLLQELPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQISDLQAQLAKAQAEVINMQCQQANLVALICMEMTQSQDQINMLQPQPNDVDMTCFFDDNNFASAWEPLWTCN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1771 244 Pfam Lateral organ boundaries (LOB) domain 87 184 IPR004883 -
Lan4g1771 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 73 237 - -
Lan4g1771 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 73 237 - -
Lan4g1771 244 Coils Coil 166 193 - -
Lan4g1771 244 MobiDBLite consensus disorder prediction 36 76 - -
Lan4g1771 244 ProSiteProfiles LOB domain profile. 86 187 IPR004883 -
Lan4g1771 244 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1771 Lan-Chr4 26426295 26428052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1771 83 243 AS2 family AT1G07900 68.072 1.73e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan4g1771 LOB 6.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1771 - - gmx:100806667 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1771 4 26426295 26428052 Lan4g1771 4 26426295 26428052 ECH
Lan20g0128 20 782766 784420 Lan4g1771 4 26426295 26428052 LSH