Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1753 ATGGAAGGAAACTATGTGAACAGAAACAGTCATAGAGAGGATCATAGCTTTGGCTTTGAAGAGCATACATGGGGAACTTCATGGCCAGCCAGAAACTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAGGTCTGCTCAAGCGTTGGGTGGACACATGAATGTTCACAGAAGGGATAGAGCAAGATTGAGATCTTCTATCTCTTCATGGGTTTCTGAGTGCCCTAAACCTAACCCTAGTACCACTAAGCCTAATAACTCATCATCTCCTTTATCTGATGAGCTTTTGAATTGCACACACCGCTCTTCACATTGTAGTCCTTATCTCACTTTGTCTTCTACCAGTGGAGATAAGAAACCAAGACTTGCATCATCTTCACAGCAGTTTCCTCCTTTGAGTCTCCAAAGCATGGAAATTAAGATGGCTAAGAACACAACAAGGGGTACTTTTGATGTTGAAGAATTGAAGGGTTGTGAAGAGGATGATGAAGGCAAGATTTTCAAGAATAGTAGTGAGCATAACATTACGTTGGATCTGGGTATAGGGTTACTAAAAGAAGAGGAGAAGTTAGATTTGGAACTTCGATTGGGGCATTAA 594 0.4141 MEGNYVNRNSHREDHSFGFEEHTWGTSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSISSWVSECPKPNPSTTKPNNSSSPLSDELLNCTHRSSHCSPYLTLSSTSGDKKPRLASSSQQFPPLSLQSMEIKMAKNTTRGTFDVEELKGCEEDDEGKIFKNSSEHNITLDLGIGLLKEEEKLDLELRLGH* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1753 197 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 7 197 - -
Lan4g1753 197 PANTHER OS07G0101800 PROTEIN 7 197 - -
Lan4g1753 197 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Lan4g1753 197 MobiDBLite consensus disorder prediction 69 92 - -
Lan4g1753 197 Pfam C2H2-type zinc finger 33 57 - -
Lan4g1753 197 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Lan4g1753 197 Gene3D Classic Zinc Finger 10 84 - -
Lan4g1753 197 SMART c2h2final6 33 55 IPR013087 -
Lan4g1753 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1753 Lan-Chr4 26162167 26163643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1753 4 196 C2H2 Transcription Factor Family AT3G23130 36.923 1.95e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan4g1753 zf-C2H2_6 5.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1753 - - gmx:102660985 236.884