Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1742 ATGGCAGTGAACATAAATTCTTCACCAAAATCAAAATGGAAGTTCCATGTTTTCTTGAGTTTTCGGGGAGAAGACACACGCTTAGGTTTCACTGATCATTTATATGCAGCCTTGCTGAGGAAGAGTATCATAACATTCAGAGATGAAGAAGAACTTGAAAGAGGTGAAGTTATCTCCAAAAAGCTCCTTCATATAATTGAGGAATCTCTTTCTTCAATAATCATAATCTCTCCAAACTATGCTTCATCCACATGGTGTTTGGATGAGCTTCAAAAGATCGTTGAAACCAAAAAAAAATTGGGTCAAGAAGTATTTCCAGTGTTCTATGGGGTGGATCCTTCTGATGTAAGGCACCAAAGGGGAAGTTTTGCAAAAGCTTTCAGAAAACATGAAGCAAAATTTGCAGCAAACAAAGGAAAGGTGCAAAAATGGAGAGATGCTTTAAAAGACATTGCCAACTTATCTGGCTGGGACTCTAAGAACAAGCATGAAATGCAACTCATTGAAGAAATTGTTGATGAAGTATGGACAAGACTAGAACGTAAATTACCATCATATAATGATGGACTTGTTGCAATTGATTCAAAAGTAGATGAAATGTGCTTACACTTAAGGCTATGGTTGGAAGATGTTCGTTTTATTGGAATATGGGGTATGGGTGGCATAGGAAAAACAACTCTTGCTACTGTTGTCTTTAAGAAAATCCGAAACCAATTTGATGTCAGTTGTTTTCTTTCCAATGTTAGAGATGCTATGAAGGGAGGAGAACAAGGTCAAGTTCATTTGCAAAATAAACTTCTTTCACATGTGAAACTAAAAAGCATGATAGTTGAGACTGCAGATCAAGGAAAAGACATTATCAGAAACCTTCTATGCAACAGGAAAGTTCTTCTGGTCCTAGACGATGTTAGCGCCAAAAGCCAACTAGAGAACTTGGCTGGAAACCAAGAATGGTTTGGTCCCGGAAGTCGAATAATAGTTACTAGTAGGGACACACACCTCTTGCTATCACATAGAGTATCGTTTGATATGTATAAGATGAGAACCTTGAATTTTGATGAGTCACTTCAACTCTTTTGCGAAAAAGCAATTAAGAGACACCAACAAAAAGAAGATTATTTGGACTTGTCCAGAAGTGTAGTTAAGTATGCTGGAGGCCTTCCTTTGGGACTTGAAGTACTAGGTTCTTTCCTTTGTGGGAGAACTGTACATGAATGGGAAAATGCTTTAATTAAGATAAGTAAAGTGCCACATGATGATATAGTGAACAAGCTTAAGATAAGTTATGATATGTTGGAAGAAGAGTGCAAGACTATATTTCTCGATATTGCTTGTTTTTTCAAGGGATGGTACAAAGATAAAGTGACAAAGATATTGGATAATTGTGGCCTTCATGCAACAATTGGAATACAGGTTCTTATTGAAAAATCATTGGTAACCTGCGATGGAAGAGTTCTAGGGATGCACGATTTGCTTGAAGAAATGGGTAAAACAATAGTTTACCAAGAATCTCCAAACGATCTTGGTCGACGCAGTAGATTGTGGTCTCAAGAGGATATTGATAAAGTATTGACAGAAAATACAGGGACCGAGAAAGTTCAAAGTTTAGTTTTGAAGCCACAAATTGAGGCATATGAAGCATATTGGCACCCTAAAGCATTCTCTAAGATGTGTAACCTTAAATTACTCATCATATTATGTGACATGCACTGCTCGCTTAGTCTCAAATGTCTTCCTAAGTCGTTAAAAGTTCTTATTTGGACGGGATATCCTTTGAAATCTCAACCGCGTGGTGTGCAACTGCATGAACTTGTTCACTTTCAGATGAGTAATAGCAAAGTAGAAAAAATTTGGAATGGAAGTCAGATTTTTGGGAAACTGAAAGTTATTGATTTGAGTTATTCCAACAATTTGATTCAAACTCCGAATATTTCTGGGGAACCAAATCTTGAAGAGCTCTTCCTTGATGGTTGTGTATCACTTATTGAACTTCACCAATCTGTTGGACAGCATAAGAAGCTTACAGTACTGAGTCTGATAGGATGCATTAAGCTTAAAATTTTGCCAAGTAAATTGGAAATGAGTTCCTTGAAAAGGCTCTTTCTTTGTGACTGCTTAAACATTAAGAGACTTCCTGATTTTGGGGAGAGCATGGAATCTTTGTCATTGTTGAATTTAATGAATTGCTCCAATCTTCTTTCCCTTCCAAATACCATTAGTAATTTGAAGTCACTTAGACGCCTCAATTTATCTGGATGCTCGAAAATCTGCAGGCTCCCGGACAATATAAATGAAAACAGGGTTTTGGAGGATCTTGATGTAAGTGAAACCTCTGTAAGAGAAGTGACTTCATCCCTATTTCATTTGGAAAATCTCAAAAGACTTTCTTTTCGAGGGTGCAGTGGGCCTGTATCCAACAACTGGGAGGAACAACCTCCCACATACTTAAGATTGCCAGCTTCTGTCTCTGGACTTTCCTCTCTAAATACTCTTGATTTAAGCTATTGCAATCTCAATTTTCGATTAATTCCTAAGGATCTTGGTCACTTATCATCGTTGGAGTCATTAATCTTAAGTGGAAATAAAGATCTTGTTCGACCTGCTGCCAGCATTTCTAATCTTTCTAAGCTAAGTTATCTTGAACTAGAAGATTGTGGGAGATATGCACATGGAGCTGTGCCTCAGCATTTGTTAGATTTTGACGTGGAGGCTGGTTTATTCTTAGATCTATGGAAGTTTTGGAAGCTGTTTGAGTCAGATGACAGCGAGCTCTTGTGCCAGGTTAGGGATCCTAGTTATCCAATTACTTACCTTGAAATTCCTCCAAAGTTTGGTAATGATATATTCTTTCCCGTGGGTCAACGTTTGTCGAAGCTTGAATCAAGTGCATCAGTAACAGTGGACATCCCTAATGAATGTGGTAAGGGTGAGTGGTGGGGACTTGTTGTATTCATTACCTTTGAAACTCTGGTGTCCTCATCATCATTTTCAACTTTCAACATAGAGCTCTGCTGGAGCTTCGAAGCTTCCCATCCTGAAGCTGGCCCTTCCTTATATCTCTCCTCCCACGCCGAGGCACATTATAACAGCTGCCTTGTAACAATGATAATGAACGATAACTATATATACATTCAGCTACATCATAGAAAGTACCACAACATAAGTGAATCAAAGGCTTTTAGCAAGCATCGAAAACCCGATTTCAGTGAGAATAGTAGGTTGCGTTTCGATGTGCAAGTTGGATTGCAAAAGATAAGGCAGTGTGGTTATCAAGTGTTATGTAAGGAAGATTTTATATCTGAAACCTTGCTAAAATGGCACAAAAGGAGTATTGACGATCCAAATTCTCAGGACTCCAGTGCTCTCAACAATTCAGATATGGAATTCAGGGGGGAATATGCAACCACTTCAAATGGAGAAGGATTGGATGCTCAAAGCTTGAAAAGAGGATTTGGTTTGGCCAATATGATAAAAGGAGTGAAGAGGTTATTTAAGCAAACATAG 3504 0.3818 MAVNINSSPKSKWKFHVFLSFRGEDTRLGFTDHLYAALLRKSIITFRDEEELERGEVISKKLLHIIEESLSSIIIISPNYASSTWCLDELQKIVETKKKLGQEVFPVFYGVDPSDVRHQRGSFAKAFRKHEAKFAANKGKVQKWRDALKDIANLSGWDSKNKHEMQLIEEIVDEVWTRLERKLPSYNDGLVAIDSKVDEMCLHLRLWLEDVRFIGIWGMGGIGKTTLATVVFKKIRNQFDVSCFLSNVRDAMKGGEQGQVHLQNKLLSHVKLKSMIVETADQGKDIIRNLLCNRKVLLVLDDVSAKSQLENLAGNQEWFGPGSRIIVTSRDTHLLLSHRVSFDMYKMRTLNFDESLQLFCEKAIKRHQQKEDYLDLSRSVVKYAGGLPLGLEVLGSFLCGRTVHEWENALIKISKVPHDDIVNKLKISYDMLEEECKTIFLDIACFFKGWYKDKVTKILDNCGLHATIGIQVLIEKSLVTCDGRVLGMHDLLEEMGKTIVYQESPNDLGRRSRLWSQEDIDKVLTENTGTEKVQSLVLKPQIEAYEAYWHPKAFSKMCNLKLLIILCDMHCSLSLKCLPKSLKVLIWTGYPLKSQPRGVQLHELVHFQMSNSKVEKIWNGSQIFGKLKVIDLSYSNNLIQTPNISGEPNLEELFLDGCVSLIELHQSVGQHKKLTVLSLIGCIKLKILPSKLEMSSLKRLFLCDCLNIKRLPDFGESMESLSLLNLMNCSNLLSLPNTISNLKSLRRLNLSGCSKICRLPDNINENRVLEDLDVSETSVREVTSSLFHLENLKRLSFRGCSGPVSNNWEEQPPTYLRLPASVSGLSSLNTLDLSYCNLNFRLIPKDLGHLSSLESLILSGNKDLVRPAASISNLSKLSYLELEDCGRYAHGAVPQHLLDFDVEAGLFLDLWKFWKLFESDDSELLCQVRDPSYPITYLEIPPKFGNDIFFPVGQRLSKLESSASVTVDIPNECGKGEWWGLVVFITFETLVSSSSFSTFNIELCWSFEASHPEAGPSLYLSSHAEAHYNSCLVTMIMNDNYIYIQLHHRKYHNISESKAFSKHRKPDFSENSRLRFDVQVGLQKIRQCGYQVLCKEDFISETLLKWHKRSIDDPNSQDSSALNNSDMEFRGEYATTSNGEGLDAQSLKRGFGLANMIKGVKRLFKQT* 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1742 1167 Pfam TIR domain 14 186 IPR000157 GO:0007165
Lan4g1742 1167 SUPERFAMILY L domain-like 488 886 - -
Lan4g1742 1167 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Lan4g1742 1167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 709 IPR044974 GO:0006952
Lan4g1742 1167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 719 923 IPR044974 GO:0006952
Lan4g1742 1167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
Lan4g1742 1167 PANTHER TMV RESISTANCE PROTEIN N-LIKE 719 923 - -
Lan4g1742 1167 PANTHER TMV RESISTANCE PROTEIN N-LIKE 21 709 - -
Lan4g1742 1167 Gene3D - 179 342 IPR027417 -
Lan4g1742 1167 Gene3D Ribonuclease Inhibitor 547 692 IPR032675 -
Lan4g1742 1167 Gene3D Ribonuclease Inhibitor 693 894 IPR032675 -
Lan4g1742 1167 Pfam NB-ARC domain 209 419 IPR002182 GO:0043531
Lan4g1742 1167 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Lan4g1742 1167 PRINTS Disease resistance protein signature 213 228 - -
Lan4g1742 1167 PRINTS Disease resistance protein signature 290 304 - -
Lan4g1742 1167 PRINTS Disease resistance protein signature 384 398 - -
Lan4g1742 1167 PRINTS Disease resistance protein signature 740 756 - -
Lan4g1742 1167 Gene3D - 349 433 IPR042197 -
Lan4g1742 1167 SMART till_3 14 154 IPR000157 GO:0007165
Lan4g1742 1167 Gene3D - 7 178 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1742 Lan-Chr4 26088994 26094149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1742 3 797 WRKY Transcription Factor Family AT4G12020 30.299 1.34e-95 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1742 - - mtr:MTR_3g080470 1320.84