Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1738 ATGGCAAATCACCCTTCTCATGTGGCCCCCACCGACGACTTCCTTGAACAAATCCTCTCCCTTCCTACTTTCCCTTCCTCCGATTCCCCTTTCCCATCCACCGACTCTTCCTCCTTCGCCGCCGCCGTGTCTTCACCGCCTCCGATGATGCTTCAACTGAACTCCTCCGATAACCAACCTCCGTTTCATTCACCACCTGTCTATCACTTAGGCTTGAGTTTGGAACAAGCTGAAGGAGGTTTCGTTAAACCTGATGATGTTTCTGTTACTGCTAATCGCTATCGTGATGATGTTAGACCTAAGAATGTTTTTCGTGGGCAACCCATGCCTACCAACGTTCCTACTGCTCCACACCCACCAGCAATGCGACCCAGAGTGCGAGCTAGAAGGGGACAGGCTACAGATCCACACAGCATAGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAACTGGTTCCTAGTGTCAACAAGACTGATAAAGCTGTCATGCTTGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTCGACTGGGTGGAGCTGGTGCAGTTGCACCACTGGTAACTGACATCCCGCTGTCATCGGTCGAGGAGGAAGGAAACCAACCAGCTTGGGAGAAGTGGTCAAACGATGGCACAGAAAGGCAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAATTTCTTCAATCAAAGGCTCTCTGCATCATGCCCATTTCACTAGCATCAGCAATATACCAGTCACAACCATCAGACTCCTCTAGCATAGTTAAGCCTGAAACTAATCCTCCTTCATAG 852 0.4859 MANHPSHVAPTDDFLEQILSLPTFPSSDSPFPSTDSSSFAAAVSSPPPMMLQLNSSDNQPPFHSPPVYHLGLSLEQAEGGFVKPDDVSVTANRYRDDVRPKNVFRGQPMPTNVPTAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDKAVMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDSSSIVKPETNPPS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1738 283 MobiDBLite consensus disorder prediction 101 136 - -
Lan4g1738 283 Pfam Helix-loop-helix DNA-binding domain 137 181 IPR011598 GO:0046983
Lan4g1738 283 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 272 - -
Lan4g1738 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Lan4g1738 283 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 272 - -
Lan4g1738 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 191 IPR036638 GO:0046983
Lan4g1738 283 SMART finulus 138 187 IPR011598 GO:0046983
Lan4g1738 283 Gene3D - 127 189 IPR036638 GO:0046983
Lan4g1738 283 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1738 Lan-Chr4 26063966 26067961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1738 62 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 72.881 1.65e-102 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan4g1738 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1738 - - gmx:100793177 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1738 4 26063966 26067961 Lan4g1738 4 26063966 26067961 ECH