Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1717 ATGTTCAAACACTGTTTCTCAAAGTTCAATGCAGCAGAATCAGAATCAACAACAAACCCTACTGCCACTATTAACACTACTTCTTCACATAATGATTATGATGAAAACCCTCCATGTCCAACCTCACCATTGATGAAGAACTTCAACTCTCTCTATGAACATGAACCTGAAGCAATGACCGCTGATTTAGCAACTGCTTTGGCCTCACAACGCTTCTTTTTCTCTTCACCTGGTCACTCCAACTCACTCATTGAATACACTACTTCATCATCTTTAGTGGGTGAGAATAATAATAAGAATAAGAATAAGAAGAAGAAGAAGGTGTTGTTATTCAAGGAAAGTGTGGCGGTACCAACTTACTCATCGGATCCTTACTTGGATTTCCGGCGATCCATGCAAGAAATGGTGGAGGCGCGTCCTGAACTCATGGATGTTAACACCAATTGGAATGTGTTACACCAACTTCTACTTTCTTATCTTGCTTTGAATCCAAAGACCACTCACAAATTCATTCTAACTGCTTTCTCTGATCTCCTTATTTCATTGATGAGTGTTCAAGTTTCATGA 567 0.3933 MFKHCFSKFNAAESESTTNPTATINTTSSHNDYDENPPCPTSPLMKNFNSLYEHEPEAMTADLATALASQRFFFSSPGHSNSLIEYTTSSSLVGENNNKNKNKKKKKVLLFKESVAVPTYSSDPYLDFRRSMQEMVEARPELMDVNTNWNVLHQLLLSYLALNPKTTHKFILTAFSDLLISLMSVQVS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1717 188 ProSiteProfiles OVATE domain profile. 117 181 IPR006458 -
Lan4g1717 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 186 IPR038933 GO:0045892
Lan4g1717 188 Pfam Transcriptional repressor, ovate 121 182 IPR006458 -
Lan4g1717 188 MobiDBLite consensus disorder prediction 16 37 - -
Lan4g1717 188 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 115 183 IPR006458 -
Lan4g1717 188 PANTHER TRANSCRIPTION REPRESSOR OFP12 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1717 Lan-Chr4 25854861 25855891 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan4g1717 Ovate 7.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1717 - - aprc:113871147 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0187 20 1236559 1237352 Lan4g1717 4 25854861 25855891 LSH