Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1667 ATGGTTGAAACTCGCCGTAGCTCCTCTTCTTCAAAGCGTACTCTCTCTTCTCCTTCTCCTTCAACTTCCAAACGATCCAAGGTTTCCGATGATGCGTCGCCGTCAGCGTTACCTGGTCCGGGAATTGTTGCTCCGGTCAACGAATCTGGAAACGGAAATGATTCTCGAGAACCTGAGCTCCGGTCTGCTGATCTACCCGATACGGCGTCGTTGAAGCCAGTGGATGTTTGCGATGAAGATAAGCCTCCTTCTGAGCCCGTTGAAGGTGAGGATATGGTGTCGCCGCAGTATCCAGGTGAAACTGCGACGGATGTGGATAAATCAAAGACAGCTGGTGCAGCGGCTGGACGGTCGAAGAAGCGGGTGACAAAATCCACAAAATCTGCCCCAAAGGCTGCGTGGGGAAAGCTCATTTCTCAGTGTTCTCAGAATCCACACTTGTCCATGTCCGAGCCTATCTTCACTGTTGGTCAAGGTCGTCACTGTAATTTATGGCTTAAAGATCCATCTGTTGGTAATGTATTGTGCAAGTTGAGTCACATAGAGCGTGGAGGTTCGTCTATTGCATTACTGGAAATAACAGGGGGTAAAGGTTCTGTTCAAGTCAATGGTAAGACACACCGCAAGAATGTCCGTCTTATTTTGAGTGGAGGTGATGAGGTGGTCTTCGGTTCTTCCGGCAAGCATGCTTATATCTTCCAGCAGCTCACAAATAACAATCTTACTACTGGCATACCTTCATCCATGAGTATTTTAGAAGCCCAGAGTGCTCCAATGAATGGAATACAAGTCGAGGCTAGATCTGGGGACTCTTCAGCTGTTGCTAGAGCATCAATATTGGCCTCATTATCTAATCTTCATAAAGATTTATCTCTCCTACCACCAACTGCTAAAACTGGCAAGAACGTCCAACAGAATACTGACATTTCATCACCTCCTTCTGGCCACGGGGATGATATTCCAGACAATGAAATGAAACCTAGCCTCAATAATGATGAACCATCTGCAGGCGTTTATGCTGACAAAACTGTTCTTGCATCCTCTATCGTTGGTAATGAAAATCCAAGCCTTGATACAATGGAAGTCGATGCTGATTTGGATGCAGATGTTGGCAAGATTACTGCTTCCTTCGAGTTGAGGCCATTATTGCGGATGCTTGAGGGCTCCTGTCCTGAGCTTGATTTAAGCGGTAGCATTTCTAAAATATTGGAAGAGCGAAGGGAATTAAGAGAACTCCTTAAAGATGTTAATACACTGACTACATTAGCATCAACCAAGCACCAAGCATTCAAGGAGAGTTTACAACAAAGAATTCTCAATGCTGACAAAATTGATGTCTCATTCGAAGATTTCCCTTATTATCTAAGTGATACAACAAAGAATGTTTTGACTTCTTCTACATATATTCATTTGAAGTGCGGCGGCTTTGGAAAATATGCTTCAGACCTCCCATCAGTGTCCCCACGGATATTGTTATCCGGTCCTGCAGGTTCGGAAATATATCAAGAGACATTGTGCAAGGCACTTGCTAAGCATTTTGGCGCCAAGATTTTAATTGTGGATTCTCTTTCCTTACCCGGTGGGGCACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCAAAGTCTGAAAGACCATCTGTGTTTTCTAAGAGAAGTACCCAGGCCACCACATTACAGCAGAAGAAACCAGCTTCTAGTGTAGATGCTGAAATTATAGGTGGATCAACATTAAGTTCCCAGGCTACGCTTAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCACTATTCTTAAAACAGGTGATAGAGTAAAATTTGTGGGTAACTTCCCTTCTGCTGTCTCATCGCTACAGAGTAATCCTTCAAGGGGACCAAGCTATGGTTCCAGGGGTAAAGTTCTCCTTGCTTTTGAAGATAACGGGTCTTCAAAAATCGGAGTTAGGTTCGACAAACCAATTCCAGATGGTAATGATCTTGGAGGCCTTTGCGAAGTTGATCATGGATTCTTTTGTTCCGCAAATCATTTACTACGAGTAGATGGTACTGGAGGAGATGACATTGACAAGCTTGCAATTAACGACATCTTTGAGGTTGTTTGTAATCAGAGTAAAAGTGGTGCTCTAGTATTGTTCATTAAGGATATAGAGAAGACAATGGTTGGTAATTCTGAAATTTTGAAAAGTAAATTTGAAAACTTGCCACAGAATGTTGTTGTTGTTGGCTCGCATACCCAGCTAGACAACCGTAAGGAAAAGACCCATCCAGGAGGCCTTCTATTTACGAAGTTTGGGAGCAATCAGACAGCACTACTCGATCTTGCTTTTCCTGATAACTTTAGTAGACTGCATGATAGGAGCAAAGAAACCCCCAAAGTAACGAAGCAACTTAATCGCCTTTTCCCAAACAGGGTGACAATACAACTGCCTCAGGATGAGGCTTTACTTTCTGACTGGAAGCAGCAGCTAGAACGCGACATTGAAACTATGAAAGCCCAGGCCAACATTCTCAGCATCCACTCAGTTCTCAACAGGATAGGATTGAATTGCTCTGACCTCGAGTCACTTTGCATCAAAGATCAAACCCTAACAACTGAAAGTGTGGAAAAGATAATTGGCTGGGCTATAAGTTACCATTTTATGCATTCAACTGAGTCTTCTACCAAAGACTCTAATTTTGTGATATCTGCAGAAAGTATTAAGTATGGGCTAAGCATTCTACATGGCATTCAAAACGAAAACAAGAGCTCAAAAAAATCACTGAAAGATGTGGTAACAGAGAATGAATTTGAGAAAAAACTGCTTGGTGATGTTATTCCACCAACTGATATTGGGGTGACATTTGATGATATTGGAGCTTTAGAGAATGTGAAAGATACCTTGAAGGAATTGGTTATGCTTCCTCTTCAGAGACCTGAATTGTTTTGTAAAGGACAGCTAACGAAGCCTTGCAAGGGAATACTGCTTTTTGGCCCACCTGGCACGGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCAGGAGCAAATTTTATAAATATTTCAATGTCTAGCATTACTTCAAAGTGGTTTGGTGAAGGGGAGAAATATGTTAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTGATTTTTGTTGATGAGGTTGACAGTATGCTAGGGAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTTAATTGGGATGGTCTACGTACCAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACGAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGAAGACTTCCACGCAGATTGATGGTTAATCTGCCAGATGCTCCAAACAGAGAAAAAATTATGAGAGTCATTTTAGCAAAAGAAGATCTAGCACCAGATGTTGATTTGGAAGCAATAGCAAATATGACTGATGGATATTCGGGGAGTGACCTAAAGAATCTGTGTGTCACAGCAGCTCACTGCCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAATTCAGCATTGGCCGAGAATAAACCTTTACCTGTATTGCATAGTAGTGTTGACATTCGTCCCTTGAAGATGGAGGATTTTAGATACGCACATGAGCAGGTTTGTGCAAGTGTTTCATCAGAATCGTCAAACATGAATGAGCTACTCCAATGGAATGACCTTTACGGAGAAGGTGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATGTAA 3753 0.4234 MVETRRSSSSSKRTLSSPSPSTSKRSKVSDDASPSALPGPGIVAPVNESGNGNDSREPELRSADLPDTASLKPVDVCDEDKPPSEPVEGEDMVSPQYPGETATDVDKSKTAGAAAGRSKKRVTKSTKSAPKAAWGKLISQCSQNPHLSMSEPIFTVGQGRHCNLWLKDPSVGNVLCKLSHIERGGSSIALLEITGGKGSVQVNGKTHRKNVRLILSGGDEVVFGSSGKHAYIFQQLTNNNLTTGIPSSMSILEAQSAPMNGIQVEARSGDSSAVARASILASLSNLHKDLSLLPPTAKTGKNVQQNTDISSPPSGHGDDIPDNEMKPSLNNDEPSAGVYADKTVLASSIVGNENPSLDTMEVDADLDADVGKITASFELRPLLRMLEGSCPELDLSGSISKILEERRELRELLKDVNTLTTLASTKHQAFKESLQQRILNADKIDVSFEDFPYYLSDTTKNVLTSSTYIHLKCGGFGKYASDLPSVSPRILLSGPAGSEIYQETLCKALAKHFGAKILIVDSLSLPGGAPSKEVDSAKESSKSERPSVFSKRSTQATTLQQKKPASSVDAEIIGGSTLSSQATLKQEVSTASSKGTILKTGDRVKFVGNFPSAVSSLQSNPSRGPSYGSRGKVLLAFEDNGSSKIGVRFDKPIPDGNDLGGLCEVDHGFFCSANHLLRVDGTGGDDIDKLAINDIFEVVCNQSKSGALVLFIKDIEKTMVGNSEILKSKFENLPQNVVVVGSHTQLDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVTKQLNRLFPNRVTIQLPQDEALLSDWKQQLERDIETMKAQANILSIHSVLNRIGLNCSDLESLCIKDQTLTTESVEKIIGWAISYHFMHSTESSTKDSNFVISAESIKYGLSILHGIQNENKSSKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIMRVILAKEDLAPDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERNSALAENKPLPVLHSSVDIRPLKMEDFRYAHEQVCASVSSESSNMNELLQWNDLYGEGGSRKMRSLSYFM* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1667 1250 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1250 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 1 30 - -
Lan4g1667 1250 Coils Coil 399 419 - -
Lan4g1667 1250 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1250 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 73 87 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 297 313 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 1 133 - -
Lan4g1667 1250 CDD FHA 159 234 IPR000253 GO:0005515
Lan4g1667 1250 Pfam AAA+ lid domain 1139 1175 IPR041569 -
Lan4g1667 1250 Gene3D - 944 1223 IPR027417 -
Lan4g1667 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 945 1223 IPR027417 -
Lan4g1667 1250 SUPERFAMILY SMAD/FHA domain 134 229 IPR008984 GO:0005515
Lan4g1667 1250 Coils Coil 819 839 - -
Lan4g1667 1250 CDD AAA 984 1117 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 547 565 - -
Lan4g1667 1250 MobiDBLite consensus disorder prediction 529 568 - -
Lan4g1667 1250 ProSitePatterns AAA-protein family signature. 1089 1108 IPR003960 GO:0005524|GO:0016887
Lan4g1667 1250 Gene3D - 1118 1212 - -
Lan4g1667 1250 SMART AAA_5 982 1119 IPR003593 -
Lan4g1667 1250 Pfam ATPase family associated with various cellular activities (AAA) 986 1115 IPR003959 GO:0005524|GO:0016887
Lan4g1667 1250 MobiDBLite consensus disorder prediction 294 336 - -
Lan4g1667 1250 Gene3D - 133 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1667 Lan-Chr4 25494133 25506166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1667 945 1193 Calmodulin-binding Proteins AT3G56690 38.672 1.12e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1667 - - gmx:100801477 1973.36