Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1663 ATGCGATCTGAAACTTCAACTTGGGTCACTTCCCTTTCATGTTCAACCTCAGGAGATGTTTCATTTGTTTCAAATCTACCTCATTGGCTTAGATTCATTTTCCTCTCTCCATGTCCTCAGAGAGCACTTTTCTCTGCTGTTGATGTCTTACTCTTGTTGACTTTCTTTGTGTTTGCCCTCACAAAACTCTATTCTAGGTTCACCTCTAATGAGAACAACCACTCAGAACTCAACAAGCCTCTTATAAGAAATAGAGAAGCTTCTGTCACAACAACAATATGGTTCAAGCTAACATTAACTGCAACATCTGTTTTGGCCATATTGTACACTGTTGCTTCTATTTTGGTTTTTACCAGTTCAACACAGGTTACATGGAAGGTAATTGATGGAGTGTTTTGGTTAGTTCAGGCCATAACACAAGTTATACTTGTAATCTTGATTATTCATGAGAAAAGATTTGAAGCTGTTGCACATCCTTTATCCCTTAGGATTTATTGGATTGCAAATTTTATCATTGTTGCTTTGTTCTCAGCTTCTGGTGTTATTCGTTTTGTCTCTGTGGAGGAAACCAAACACTTCAGCTTCTTGGTGGATGACATAGCTTCTTTCATTTCTCTCCCTCTGTCACTTTTTCTGCTATTTGTTGCAGTTAAAGGATCCACTGGGATTAAGTCCAGTAACGACGGAACGCAACCGCGTAATGGTGATGATTCCAAGCTATATGATGATGTTACTGGGAGAAAAGCCAGTGTTACTGGCTTTGCCTCAGCTTCTATAATATCCAAGGCCTTTTGGATTTGGATAAACCCCTTATTGAGCAAAGGGTACAAGGCACCACTGAAGATTGATGATGTTCCATACCTTTCTCCACTGCATAGAGCTGAGAGGATGTCAGTGATCTTTGAATCAAAATGGCCTAAATCAGATGAGAGTTCAAAGCATCCGGTTCGAACCACATTGCTTCGGGTCTTCTGGAGGGAAATAGCCTTCACTGCCTTCCTTGCTGTTGTTAGGCTAAGTGTCATGTTTGTAGGGCCTGTTCTCTTACAGAGTTTTGTTGATTTCACAGCTGGGAAGGGAAGCTCTCCATATGAAGGATACTACCTAGTGTTGATTCTCCTATGTGCCAAATTTGTTGAAGTTTTGGCAACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGGATGCTTATCAGATGCACTCTCATCACTTCCTTGTACAAGAAGGGGTTGAGGCTAACATGTTCGGCTCGGCAGGACCATGGTGTTGGGCCTATTGTGAATTACATGGCTGTTGATGCCCAACAACTCTCTGATATGATGCTGCAGCTACATGCTGTGTGGATGATGCCATTTCAACTTGGTATTGGCTTAATATTGCTTTACAAATGTTTAGGTGCAGCAACAATTACAGCTTTGATCGGACTTCTTGGTATTATTGGGTTCATTTTGTTAAGTACTGGACAAAACAAAAAGTACCAATTTAATGCAATGATAAAGCGTGACTCGAGAATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTGATCAAGTTCCAGGCATGGGAAGAGCATTTCAACCAGAGAATTCAGGGTTTCCGTGAGTCAGAGTTCGGGTGGTTTTCTAAGTTTATGTACTCAGTTTCTGGCAATATTGTTGTGTTGTGGAGTGCACCATTATTGATATCAACTCTCACGTTTGGCACGGCGATTTTGCTTGGAGTTCCACTTGATGCTGGGACAGTTTTCACCACCACAACCGTGTTTAAGATCCTGCAGGAACCTATTAGAACGTTCCCACAGTCTATGATATCTCTTGCACAAGCAATGGTGTCATTGGGAAGGTTAGATAAGTACATGTCTAGCAGGGAATTATCCGAAGATTCGGTTGAGAGAGTGAGGGGTTGTGATGGACAAACTGCTGTGGAGGTCAAAGATGGTACCTTTAGCTGGGATGATGATTCTCAACAGCAGGACTTGAAACATATTAATTTGGATATCAATAAGGGTGAGCTTACTGCTATAGTTGGGACTGTAGGGTCAGGAAAGTCTTCTCTCCTTGCATCAATTCTTGGTGAGATGCACAAAATTTCTGGAAAGGTTCATGTTTGTGGGAGTACTTCTTATGTTGCACAAACATCATGGATTCAAAATGGGACCATTGAAGAAAACATTCTCTTTGGATTACCCATGATCAGACAGAAGTACAATGAAGTTGTCAGGGTTTGTTGCTTAGAGAAAGACCTGGAAATGATGGAGTATGGAGATCAGACTGAGATCGGAGAGCGTGGCATCAATCTAAGTGGTGGCCAGAAGCAGCGTATACAACTTGCCAGGGCTGTATATCAAGACTGTGATATATATCTTCTCGACGATGTTTTCAGTGCTGTTGATGCACATACCGGCTCTGAAATCTTTAAGGAATGTGTGAGAGGAGCTCTAAAAGGCAAGACCATTATTCTTGTCACACACCAAGTAGACTTCCTACATAATGTCGATCGTATAGTGGTGATGAAAGATGGAATGATTGCCCAATCAGGGAAGTACGATGATCTACTCAATTCCGGATTGGATTTTTCTGCTCTTGTAGCTGCACATGAGACCTCTATGGAACTAGTAGAACAAGGTGCTGCAGGTGAAAATTTTGACAAACCAATTAAATCTCCAAAGGCAGCTCCTAATCATCGAGAAACGAACGGCGAAAGCAATTCTCTTGACCAGCCCAAGTCTAACAAAGAAAATTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGGCAAGTAAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTTGGATGGTGGGGTGTTACAGCAGTGGTCCTTTTTTCTGTGTTGTGGCAAGCATCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACCTCAGCAAAGCGCGCTCACCTGTTTGATCCTACTGTGTTTATTTCCATCTACGCGATTATTGCTGTAGTTTCACTTGTTTTGATCGTTCTAAGAACCTACTCTGTCACTGTCGTCGGGCTAAAGACAGCACAGCTTTTCTTCTCACAAATTCTTAATAGCATCTTACATGCACCAATGTCTTTCTTCGACACTACTCCATCAGGGAGAATTCTAAGCAGGGCATCGACTGATCAGACCAATGTTGATATCTTCATCCCCCTGTTCATGAACTTTGCTTTGGCTATGTACATCACAGTAGTCAGCATCATCATAATCACATGTCAAAATTCTTGGCCAACAACTTTCTTGCTAATTCCTCTTATTTGGTTGAATGTTTGGTACCGGCGCTATTATCTTGCTTCATCTCGTGAATTGACTCGTCTCGATTCAATTACAAAAGCGCCTGTCATTCATCACTTCTCTGAAAGCATTTCTGGGGTCATGACAATCCGTGCATTCAAAAAGCAGAAAGAGTTTAGTGATGAAAATGTTAAACGTGTTAATGATAATTTGCGAATGGATTTCCACAACTTCAGTTCCAATGAGTGGTTGGGTTTCCGCTTAGAATTGCTTGGAAGCTTAATGTTTTGCTTGTCTACTTTATTCATGATCATGTTACCCAGCAGCATCATAAAACCAGAAAATGTTGGTTTATCACTCTCTTACGGAATATCGTTAAATTCGGTGCTGTTCTTTGCTGTATACATGAGCTGTTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATAAAGCAGTTCACAAATATTCCATCAGAATCAGCATGGAAAATTGAAGATCGTTCTCCTCCTTCAAATTGGCCTGGTCATGGCAATGTTGATATCAAGGACTTGCAGGTCAGATATCGTCCGAACACTCCGCTGGTTCTTAAAGGCATTACTTTAAGCATTAGTGGAGGAGAGAAGATTGGTGTCGTTGGTCGAACAGGGAGTGGAAAATCAACTTTAATTCAAGTTTTCTTCAGGCTGGTGGAACCTACAGGAGGGAAAATAATCATTGATGGCATTGACATATCCGTCTTAGGACTTCATGATCTTCGATCTCGGTTTGGTATCATCCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTCAGAAGTAACATTGATCCAACTGGACAGTATACAGAAGAAGATATATGGAGGAGTCTTGAACGTTGTCAACTAAAAGATGTAGTGGCTGCTAAGGCTGAGAAACTCGATGCTTTAGTGGTTGATAATGGAGATAACTGGAGTGTCGGGCAGAGGCAGCTACTTTGTTTAGGGCGCGTTATGCTTAAGCAAAGTGGGCTATTGTTCATGGATGAGGCAACAGCTTCTGTTGATTCTCAAACTGATGCTGTAATTCAGAGGATCATCCGAGAGGATTTCGCGTCACGCACCATCATCAGCATTGCTCACAGAATACCAACAGTCATGGACTGCAATAGAGTACTAGTTGTTGATGCAGGACGAGCTAAAGAATTCGACAAGCCCTCCAACTTGCTTCAAAGGCCATCGCTCTTCGGCGCGCTAGTTCAAGAGTATGCCAACCGCTCAAATGAACTATAA 4521 0.4169 MRSETSTWVTSLSCSTSGDVSFVSNLPHWLRFIFLSPCPQRALFSAVDVLLLLTFFVFALTKLYSRFTSNENNHSELNKPLIRNREASVTTTIWFKLTLTATSVLAILYTVASILVFTSSTQVTWKVIDGVFWLVQAITQVILVILIIHEKRFEAVAHPLSLRIYWIANFIIVALFSASGVIRFVSVEETKHFSFLVDDIASFISLPLSLFLLFVAVKGSTGIKSSNDGTQPRNGDDSKLYDDVTGRKASVTGFASASIISKAFWIWINPLLSKGYKAPLKIDDVPYLSPLHRAERMSVIFESKWPKSDESSKHPVRTTLLRVFWREIAFTAFLAVVRLSVMFVGPVLLQSFVDFTAGKGSSPYEGYYLVLILLCAKFVEVLATHHFNFNSQKLGMLIRCTLITSLYKKGLRLTCSARQDHGVGPIVNYMAVDAQQLSDMMLQLHAVWMMPFQLGIGLILLYKCLGAATITALIGLLGIIGFILLSTGQNKKYQFNAMIKRDSRMKAVNEMLNYMRVIKFQAWEEHFNQRIQGFRESEFGWFSKFMYSVSGNIVVLWSAPLLISTLTFGTAILLGVPLDAGTVFTTTTVFKILQEPIRTFPQSMISLAQAMVSLGRLDKYMSSRELSEDSVERVRGCDGQTAVEVKDGTFSWDDDSQQQDLKHINLDINKGELTAIVGTVGSGKSSLLASILGEMHKISGKVHVCGSTSYVAQTSWIQNGTIEENILFGLPMIRQKYNEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIILVTHQVDFLHNVDRIVVMKDGMIAQSGKYDDLLNSGLDFSALVAAHETSMELVEQGAAGENFDKPIKSPKAAPNHRETNGESNSLDQPKSNKENSKLIKEEERETGQVSLHIYKLYCTEAFGWWGVTAVVLFSVLWQASMMASDYWLAYETSAKRAHLFDPTVFISIYAIIAVVSLVLIVLRTYSVTVVGLKTAQLFFSQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDIFIPLFMNFALAMYITVVSIIIITCQNSWPTTFLLIPLIWLNVWYRRYYLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFKKQKEFSDENVKRVNDNLRMDFHNFSSNEWLGFRLELLGSLMFCLSTLFMIMLPSSIIKPENVGLSLSYGISLNSVLFFAVYMSCFIENKMVSVERIKQFTNIPSESAWKIEDRSPPSNWPGHGNVDIKDLQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISVLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTEEDIWRSLERCQLKDVVAAKAEKLDALVVDNGDNWSVGQRQLLCLGRVMLKQSGLLFMDEATASVDSQTDAVIQRIIREDFASRTIISIAHRIPTVMDCNRVLVVDAGRAKEFDKPSNLLQRPSLFGALVQEYANRSNEL* 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1663 1506 SMART AAA_5 1290 1474 IPR003593 -
Lan4g1663 1506 SMART AAA_5 670 851 IPR003593 -
Lan4g1663 1506 Coils Coil 1496 1506 - -
Lan4g1663 1506 MobiDBLite consensus disorder prediction 896 912 - -
Lan4g1663 1506 Gene3D ABC transporter type 1, transmembrane domain 318 619 IPR036640 GO:0005524|GO:0016021
Lan4g1663 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1497 IPR027417 -
Lan4g1663 1506 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Lan4g1663 1506 Pfam ABC transporter 1281 1429 IPR003439 GO:0005524
Lan4g1663 1506 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Lan4g1663 1506 CDD ABCC_MRP_domain2 1262 1482 - -
Lan4g1663 1506 Gene3D - 1247 1496 IPR027417 -
Lan4g1663 1506 Gene3D - 620 884 IPR027417 -
Lan4g1663 1506 Gene3D ABC transporter type 1, transmembrane domain 909 1245 IPR036640 GO:0005524|GO:0016021
Lan4g1663 1506 CDD ABC_6TM_ABCC_D2 947 1239 IPR044726 GO:0140359
Lan4g1663 1506 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Lan4g1663 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 86 1505 - -
Lan4g1663 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 864 IPR027417 -
Lan4g1663 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Lan4g1663 1506 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 86 1505 - -
Lan4g1663 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1264 1498 IPR003439 GO:0005524
Lan4g1663 1506 MobiDBLite consensus disorder prediction 882 915 - -
Lan4g1663 1506 SUPERFAMILY ABC transporter transmembrane region 944 1244 IPR036640 GO:0005524|GO:0016021
Lan4g1663 1506 Pfam ABC transporter transmembrane region 330 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1663 1506 Pfam ABC transporter transmembrane region 949 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1663 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 329 609 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1663 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 949 1227 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g1663 1506 CDD ABCC_MRP_domain1 643 842 - -
Lan4g1663 1506 SUPERFAMILY ABC transporter transmembrane region 320 625 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1663 Lan-Chr4 25462479 25469421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1663 632 859 Calmodulin-binding Proteins AT2G36910 31.967 8.41e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1663 - K05666 gmx:100793361 2482.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1663 4 25462479 25469421 Lan4g1663 4 25462479 25469421 ECH