Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1656 ATGATCATAATCTTCTTTCTGTTTATATTTATTTCCTTCCTCACAAATACTAGCCAATTGGTATTTTCAAAAGAGCAATATAATGTTAGTGAAGTATGCAAAGTAACAAGGTATCCAAACCTTTGTATCCACTCGCTAGCACCATTCTCTCTGAGTGAAGGAAGAAGCCTAAGCAAGTGGGCAAGGGTAGGAGTATCAGTAACAATAAGCGAGGTTAAGAGTGTTCAATCATATCTAGCAAGGTTGAAGAGACAAGGGCATTTCAAAGGAAGAAAAAAAGTTGCACTTTCAGATTGTATTGAGACTTTTCAATATGCACTTGATGAACTTCACAGTTCACTTAATGTGCTAAGAAGATTGAGCAAAAGCACTTTTGGAACCCAAATGGGGGACTTAAATACATGGTTAAGTGCAGCACTCACTGATGAAGATACTTGTCTTGATGGGTTTGAAGACAATAAGGAAAAGAAAATCAAGCTGCTAAGAAATCAGGTTCTGAAAGCTTATTATATAACAAGTAACGCTTTGGCTCTTGTTAACAAGCTTGCCACTACAGGTTTAGATCCATAG 570 0.3684 MIIIFFLFIFISFLTNTSQLVFSKEQYNVSEVCKVTRYPNLCIHSLAPFSLSEGRSLSKWARVGVSVTISEVKSVQSYLARLKRQGHFKGRKKVALSDCIETFQYALDELHSSLNVLRRLSKSTFGTQMGDLNTWLSAALTDEDTCLDGFEDNKEKKIKLLRNQVLKAYYITSNALALVNKLATTGLDP* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1656 189 CDD PMEI-like_3 32 184 - -
Lan4g1656 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 182 IPR006501 GO:0004857
Lan4g1656 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 184 IPR035513 -
Lan4g1656 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 182 IPR035513 -
Lan4g1656 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 177 - -
Lan4g1656 189 SMART PMEI_2 24 178 IPR006501 GO:0004857
Lan4g1656 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 177 - -
Lan4g1656 189 Pfam Plant invertase/pectin methylesterase inhibitor 29 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1656 Lan-Chr4 25425311 25426295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1656 33 187 Carbohydrate Esterase AT3G14310 36.025 2.09e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1656 - - qsu:112006490 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1656 4 25425311 25426295 Lan4g1656 4 25425311 25426295 ECH