Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1640 ATGTTATCAGAGTTGATGAAATTTTTGAGGGCCTGCTTTCGGCCGAGCTCGGACAGATATGCACGTACAGGTTCGGATGCTGGAGGTAGACAGGATGGACTATTGTGGTACAAAGACTCAGGACAGCATTTTCATGGTGAATTTTCGATGGCTGTGATCCAAGCCAATAACTTGCTGGAGGATCAGAGTCAGGTTGAATCTGGTACTTTGAGTACCAATGAGTTTGGCCCTTATGGTACCTTCGTTGGGGTTTATGATGGGCATGGAGGGCCTGAGACATCGAGGTTTATCAATGATCACCTATTTCACCATATCCAGAGATTTACTTCAGAGCAACAATCTATGTCAGTGGATGTAATTCGCAAGGCATTTCAAGCAACAGAAGATGGATTTATGTCACTCGTTGCCAGACAATGGTCAATGAAGCCACAAATCGCATCTGTTGGATCGTGCTGTCTCGTTGGTGTTATTTGTAATGGAACTCTTTATATAGCAAATGCTGGCGATTCTCGGGCTGTTATGGGAAGAGTAGTCAAGGCAACTGGTGAGGTTTTAGCCACACAATTATCAACAGAGCACAATGCATCAATAGAATCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGATCCAAATATTGTTGTTTTAAAGCATAACGTATGGCGTGTAAAGGGCATTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAATTCAATAGAGAACCTCTTTATGTTAAGTTTCGACTTCGTGAGCCGTTCAAGAGGCCAATACTGAGTTCAGAACCATCAATAACAGTGCATCAGTTGCAACCACATGATCAATTTGTTATATTAGCATCTGATGGGCTATGGGAGCACCTCAGCAATCAAGAAGCAGTTGATATAGTTGCAAATAATCCCCACAATGGAAGTGCAAGGAGGCTGGTGAAAGTTGCACTTCAACAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTGAAGAAAATTGACCGTGGAGTTCGTCGACATTTCCACGATGACATCACTGTGATTGTTCTCTATTTTGACTCAAATCTCACGAGTCGGGCAAGCACAGTAAAGTTCCCTAGAATTTCCGTTAGAGGGGGCGGTATTCACCTGCCTCCTAACACACTGGCACCTTGTACAACACCAACGGAGGTTGGTGGTACCTGA 1194 0.4313 MLSELMKFLRACFRPSSDRYARTGSDAGGRQDGLLWYKDSGQHFHGEFSMAVIQANNLLEDQSQVESGTLSTNEFGPYGTFVGVYDGHGGPETSRFINDHLFHHIQRFTSEQQSMSVDVIRKAFQATEDGFMSLVARQWSMKPQIASVGSCCLVGVICNGTLYIANAGDSRAVMGRVVKATGEVLATQLSTEHNASIESVRQELHSLHPDDPNIVVLKHNVWRVKGIIQVSRSIGDVYLKKAEFNREPLYVKFRLREPFKRPILSSEPSITVHQLQPHDQFVILASDGLWEHLSNQEAVDIVANNPHNGSARRLVKVALQQAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYFDSNLTSRASTVKFPRISVRGGGIHLPPNTLAPCTTPTEVGGT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1640 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Lan4g1640 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Lan4g1640 397 SMART PP2C_4 39 353 IPR001932 -
Lan4g1640 397 Pfam Protein phosphatase 2C 80 323 IPR001932 -
Lan4g1640 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Lan4g1640 397 Gene3D - 37 365 IPR036457 -
Lan4g1640 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Lan4g1640 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Lan4g1640 397 CDD PP2Cc 48 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1640 Lan-Chr4 25285905 25289707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1640 1 397 PP2C-type Phosphatase Gene Family AT4G38520 74.559 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0249 20 1687712 1691710 Lan4g1640 4 25285905 25289707 LSH
Lan11g1399 11 22173316 22177484 Lan4g1640 4 25285905 25289707 LSH
Lan20g1037 20 11294622 11298295 Lan4g1640 4 25285905 25289707 LSH
Lan9g0440 9 6690567 6693988 Lan4g1640 4 25285905 25289707 PCT
Lan4g1640 4 25285905 25289707 Lan9g0440 9 6690567 6693988 PCT