Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1632 ATGCAATCTAGTATAAGAAAATCATTCAATTCCAATGCTTCATATAGTAATAAGCTTTCTAGAAGGTTCTCACTTACCGGAAACGCTGACTCATCTTCCTCCGATCCTGAAAATCTTCCAATCCTCCGCCACCAACAAAATAACCACCCTTATCCTCCGCCCTCTATGGCGGCCGGAGGTGATTGTGTTATTAAGATTAATGACACTGATCCCACTCTTGTTTCTCCATCCATTTGGAGAGAATCAAGCTACGATTTCTGGAATGATGATGGTACTACTGATGAACGAGAAAATGCAAATCAAGAGAGTTTCGATTTTCGGCATAAAGCTCAGTTGTTGTCGCTGGAGGAGGATCCACCGGCGAGGTTGATTGGGAAGTTTTTGCATAAGCAGAGAGCTTCCGGTGAGATTTCGTTGGATATGGATTTGGAAATGGACGAGTTGCAGCAGGATTCCGTCGACGGGAACCTTACGCCGGTTGAAGAGTCGCCGACGGTGAACCAGTACCGTATCTCAAGGGATGTAAAGGTTTCGTTCGAGGAACCTGCTTTGAACGTGGTTGAGGTAGCAAACGATCACTTCGTTAGAAGAAGGAATAGCAAGGATTCGCCGTCGGTCGGAGAGTTTCAACGGCCGCCGAAACATGATCGTGGAGCTGGATCTCCGTCTCCCTCCGGTGATGGTGAGGTTTTGAGGTGCACCTCAAATGCTTCATTTGAGAGGAACCTTTCTATGCAGAGAAAAAGTTCGTTATTGAAGGCAAAAACCCGGTCCAGATTGTTAGACCCGCCTGAAGAGCCGGATAAGAAATCGGGTCGGGTACCGAGATCGGGTCAGCTGTTCTCCGGATTTACGGGAAAGAAGGGTGGTGATGATGAAGAGGATGATCCTTTTTTGGAAGAGGATCTTCCAGATGAGTATAAAAAAACTCGTTTCAGCTTTTGGATTTTGCTTGAATGGTTGAGCTTGATTTTGATTATTGGTTTTTTGATAACCACTCTTAGTATTCCTCTTTTGAGGAGCAAGAATCTGTGGCAGCTTAAGTTATGGAAATGGGAAGTAATGATTTTGGTTTTGATATGTGGTAGGTTGGTATCTGATTGGGTGATTAGAATAGCTGTGTTTTGTATTGAGAGGAATTTCCTTTTGAGGAAGAGAGTGTTGTATTTTGTGTATGGTGTGAAGAAAGCAGTGCAAAATTGTGTGTGGTTGGGTCTTATTTTGATTGCTTGGCACTTGTTGTTTGATAAGAGAGTTCAGAGGGAAACTAAAAGTTCCTTCCTTGATTATGTGACTAAGATTTTGGTGTGCTTCTTGGTGGGTACTCTGGTATGGTTGGTGAAAACCCTTGCGGTTAAGGTGCTTGCTTCTTCTTTCCATGTTAGTACCTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACACTCTCGGGGCCGCCTTTGATTGAACTTCAAAAGGCTGAAGAAGAGGAACAAAAGCTTGCTGACGAGGTTCAGAAGCTGCAGAATGCTGGGGTTACCATACCTCCTGGTCTTAGGGCAACTGCTTTCTCTACCATCAAGAGTGGAAAGTTGAGGAGTGGAGTGCTTCAGAGAAGCCCTATGATTTCCCGTCCGCTTTCGAAGAAGTTGGATGATGGGAAGGGTGGGATAACTATTGATCATCTACATAAGCTGAATCCGAAAAATGTTTCTGCTTGGAATATGAAAAGGTTGATTAATATGGTTCGGCATGGGGCTCTTACTACATTGGATGAGCAGATACTTGGGTCAACTACTGAGGATGAGAATGCCACACAGATTAGAAGTGAAAATGAGGCCAAAGCAGCAGCAAAGAAAATATTTCTAAATGTTGCCAGGCGCGGTTGCAGGTGTATACGCTTGGATGACTTGCTGCGTTTTATGCGAGAAGATGAAGCTGAAAAAACAATAAGTCTCTTTGAAGGAGCATCTGATAGTGGGAGAATCAGCAAACCAGCCTTGAAGAACTGGGTGGTTACTGCCTTCCGAGAGAGGAGAGCACTTGCTCTGACATTGAATGATACCAAAACGGCAGTGAACAAACTTCATAGGATGCTCAATTTCTTAGTTATACTGATCATAGTGATTATTTGGCTCTTGATATTAGGAATTGCCACCACCAAATTTCTTCTCTTCTTGAGCTCACAGGTTGTCTTGGTTGCATTTATATTTGGAAATACCTGCAAGACCATATTTGAATCAATTATTTTCTTGTTCGTCTTGCACCCATTTGACGTGGGAGATAGATGTGAAATTGATGGGATCCAGATGGTTGTAGAAGAGATGAACATATTAACAACCGTATTTCTGAGATACGACAATCAAAAGATTCTGATCCCGAACAGTGTCCTTGCTACTAAGGCCATAAATAACTTCTACCGTAGTCCTGATATGGGAGATGCTATTGAATTCTGTATACATGTATGTACCCCAATTGAAAAGATTTCAGCTGTGAAACACAGAATACAAAGTTACATTGACAACAAAAAGGAGCATTGGTATGCTTCACCTCTCATAGTCTTCAAGGATTGTGAACAATTAAACATGATAAGATTGGCAATATGGCCAACACATAAAATGAATTTCCAAGACATGGGAGAAAGATTCTTGAGGAGATCCCTTTTGATTGAAGAGATGATCAAGATTTTCCAGGAGCTTGACTTGCAGTACCGTCTCTTGCCACTTGACATTAGCATTAGAAGCATGCCTACTACTTCTGACCGACTTCCCCCTAGTTGGACGACAATCACAGGTTGA 2793 0.4257 MQSSIRKSFNSNASYSNKLSRRFSLTGNADSSSSDPENLPILRHQQNNHPYPPPSMAAGGDCVIKINDTDPTLVSPSIWRESSYDFWNDDGTTDERENANQESFDFRHKAQLLSLEEDPPARLIGKFLHKQRASGEISLDMDLEMDELQQDSVDGNLTPVEESPTVNQYRISRDVKVSFEEPALNVVEVANDHFVRRRNSKDSPSVGEFQRPPKHDRGAGSPSPSGDGEVLRCTSNASFERNLSMQRKSSLLKAKTRSRLLDPPEEPDKKSGRVPRSGQLFSGFTGKKGGDDEEDDPFLEEDLPDEYKKTRFSFWILLEWLSLILIIGFLITTLSIPLLRSKNLWQLKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLILIAWHLLFDKRVQRETKSSFLDYVTKILVCFLVGTLVWLVKTLAVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIELQKAEEEEQKLADEVQKLQNAGVTIPPGLRATAFSTIKSGKLRSGVLQRSPMISRPLSKKLDDGKGGITIDHLHKLNPKNVSAWNMKRLINMVRHGALTTLDEQILGSTTEDENATQIRSENEAKAAAKKIFLNVARRGCRCIRLDDLLRFMREDEAEKTISLFEGASDSGRISKPALKNWVVTAFRERRALALTLNDTKTAVNKLHRMLNFLVILIIVIIWLLILGIATTKFLLFLSSQVVLVAFIFGNTCKTIFESIIFLFVLHPFDVGDRCEIDGIQMVVEEMNILTTVFLRYDNQKILIPNSVLATKAINNFYRSPDMGDAIEFCIHVCTPIEKISAVKHRIQSYIDNKKEHWYASPLIVFKDCEQLNMIRLAIWPTHKMNFQDMGERFLRRSLLIEEMIKIFQELDLQYRLLPLDISIRSMPTTSDRLPPSWTTITG* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1632 930 PIRSF Memb_At2g17000 68 930 IPR016688 -
Lan4g1632 930 MobiDBLite consensus disorder prediction 254 300 - -
Lan4g1632 930 MobiDBLite consensus disorder prediction 24 52 - -
Lan4g1632 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 919 IPR016688 -
Lan4g1632 930 MobiDBLite consensus disorder prediction 197 215 - -
Lan4g1632 930 SUPERFAMILY Sm-like ribonucleoproteins 745 804 IPR010920 -
Lan4g1632 930 MobiDBLite consensus disorder prediction 24 53 - -
Lan4g1632 930 Gene3D - 755 804 IPR023408 -
Lan4g1632 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 919 - -
Lan4g1632 930 Coils Coil 486 509 - -
Lan4g1632 930 Pfam Mechanosensitive ion channel 697 898 IPR006685 GO:0016020|GO:0055085
Lan4g1632 930 MobiDBLite consensus disorder prediction 197 231 - -
Lan4g1632 930 MobiDBLite consensus disorder prediction 258 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1632 Lan-Chr4 25234899 25238967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1632 78 927 Mechanosensitive Ion Channel Family AT1G78610 58.418 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1632 K22048 - gmx:102665658 1301.58