Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1631 ATGACTCGAGGCCATGATGTCATACCGAAGGTCATTGTTAGTGACTATGAAGATAACCACCCTCATCCTCCGTCATCCATGGCGGCCGGAGGAGATCATGCTCTTAAGATTAACGACGCTAATCCCACTGTTCTTTATCCATCCATGTGGAGAGAATCCAGCTACGAATTCTGGAATGATGATGGCACCACCACTAGCTCTGATGAACTAGAAAATAAAATTCAGGAGAGCTTCCATTTTCGGCATAAAGCTCAGTTATCGCCGAAAAAGGATCCACCGTCGATGCTGATTGGGAAGTTTTCGCATAATCAGAAAGCTTCTGGTGACTTTTCGTTGGATATGGATTTGGAAATGCACGAGTTGCAGCATAATTCCAGCGACGTGAAGTTCACACCGTTTGTAGAGTTTCAAAGGCTGCTGAAACATGGTCGTCATGGTGGAGTTCCGTCTCCCTCCGGTGATAGTGAGGTTTTGAAATGTACCTCAAATGCTTCATTTGAGAGGAACCTTTCTAAGCAGAGAAATAGTACGTTATTGAAGGCTAAAAACGTGTCCAGATTGTTAGACCCACCCGAAGAGCCGAATAAGAAATCGGATAGGGTCCCGAGATCAGGTCAGATATTTCCGGCATTTGTGGGGAAAAAGGGTGGTGATGATGAAGAGGATGATCCTTTTTTGGAAGAGGATCTTCCAGATGAGTATAAAAAAACTCGTTTTAGCTTTTGGATTTTGCTTGAATGGTTGAGCTTGATTTTGATCATTACTTTATTAATAGCCACTCTTAGTATTCCTCTTTTGAGGAACAAGAATCTGTGGCAGCTTAAGTTATGGAAATGGGAAGTGATGATTTTGGTTTTGATATGTGGTAGGTTGGTTTCTAATTGGGTGATTAGAATAGCAGTGTTTTGTATTGAGAGGAATTTCATTCTGAGGAAGAGAGTGTTGTATTTTGTGTATGGTGTGAAGAAAGCAGTGCGGAATTGTGTGTGGTTGGGTCTTATTTTGATTGTTTGGAACTTATTGTTTGATAAGAGAGTTCAGAGTGAAACTAATAGCCCCTTCCTTGAATATGTGACTAAGATTTTGGTGTGCTTCTTGGTGGGTACTCTGGTATGGTTGGTGAAAACCCTTGTGGTTAAGGTGCTTGCTTCTTCTTTCCATGTTAGTACTTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACACTCTCGGGGCCGCCTTTGATCGAACTTCAAAAGGCTGAAGAAGAGGAAAAGAGGTTTGCTGATGAGGTTCAGAAGCTGCAGAATGCTGGGGTTACCACACCTCCTGGTCTTAGGGCAACTTCTTTCTCTACCATCAAAAGTGGAAGGTTCAGGAGTGGAGTGCTCCAGAGAAGCCATATGGTTTCGGGTTCGCTTCCGATGAAGTCAGATGATGGGAATGTTGGGATAACTATTGATCATCTGCATAAACTGAATCAGAAAAATGTTTCTGCTTGGAATATGAAAAGGTTGATTAATATAGTCCGGTATGGGGCTCTTACTACATTGCATGAGAAGATACTTGGGTCAATTAATGAGGATGAGAATGCTACACATATTAGAAGTGAAATTGAGGCCAAAGCAGCTGCAAAGAAAATATTTCTGAATGTTTCCAGGCACGGTTGCAGGTATATACGCATGGATGACTTGATGTGTTTTATGCATAAAGATGAAGTTGAAAAAACATTAAGTCTCTTTGAAGGAGCATCTGATAGCAGGAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTCAATGCCTTTCGAGAGAGGAGAGCACTTGCTCTGACATTGAATGATACCAAAACAGCAGTGAACAACCTTCATAGGATGCTCAATTTCTTAGTCCTACTGATCATAGTGATTATTTGGCTCTTGATATTAGGAATCGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGGTTGTCTTGGTTGCATTTATATTTGGAAATACCTGCAAGACCGTATTTGAATCAATTATTTTCTTGTTCATCTTGCATCCATATGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTTGTAGAAGAGATGAACATATTAACAACCACATTTCTCAGATATGATTTTCAAAAGATTCTGATCCCTAACAGCGTCCTCGCTACTAAGGCCATAAGTAACTTCTATCGTAGTCCTGATACGAGAGATTCTGTTGAATTCTATATGCATGTATCTACCCCAATTGAGAAGATTTCAGCTGTGAAACACAGAATACAGAGTTACATTGACAACAAGAAGGAGCATTGGTATGCTTCACCTTTCATATTCCTCAAGGATTGTGAACAATTAAACATGATAAGATTGGCAATATGGCCGAGACATAAAATGAATTTCCAAGACATGGGAGAAAGATTCTTGAGGAGATCCCTTTTGATTGAAGAAATGATCAAGATTTTCCAGGAGCTCGACTTGCAGTACCGTCTCTTGCCACTCGATATTAGCATTAGAAACATGCCTACCACTTCTGACCGAGTTCCGCCTAGTTGGGCAACAACCACAGGTCGAGTATAA 2580 0.4093 MTRGHDVIPKVIVSDYEDNHPHPPSSMAAGGDHALKINDANPTVLYPSMWRESSYEFWNDDGTTTSSDELENKIQESFHFRHKAQLSPKKDPPSMLIGKFSHNQKASGDFSLDMDLEMHELQHNSSDVKFTPFVEFQRLLKHGRHGGVPSPSGDSEVLKCTSNASFERNLSKQRNSTLLKAKNVSRLLDPPEEPNKKSDRVPRSGQIFPAFVGKKGGDDEEDDPFLEEDLPDEYKKTRFSFWILLEWLSLILIITLLIATLSIPLLRNKNLWQLKLWKWEVMILVLICGRLVSNWVIRIAVFCIERNFILRKRVLYFVYGVKKAVRNCVWLGLILIVWNLLFDKRVQSETNSPFLEYVTKILVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIELQKAEEEEKRFADEVQKLQNAGVTTPPGLRATSFSTIKSGRFRSGVLQRSHMVSGSLPMKSDDGNVGITIDHLHKLNQKNVSAWNMKRLINIVRYGALTTLHEKILGSINEDENATHIRSEIEAKAAAKKIFLNVSRHGCRYIRMDDLMCFMHKDEVEKTLSLFEGASDSRKISKSALKNWVVNAFRERRALALTLNDTKTAVNNLHRMLNFLVLLIIVIIWLLILGIATTKFLLFVSSQVVLVAFIFGNTCKTVFESIIFLFILHPYDVGDRCEIDGVQMVVEEMNILTTTFLRYDFQKILIPNSVLATKAISNFYRSPDTRDSVEFYMHVSTPIEKISAVKHRIQSYIDNKKEHWYASPFIFLKDCEQLNMIRLAIWPRHKMNFQDMGERFLRRSLLIEEMIKIFQELDLQYRLLPLDISIRNMPTTSDRVPPSWATTTGRV* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1631 859 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 153 855 IPR016688 -
Lan4g1631 859 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 31 132 IPR016688 -
Lan4g1631 859 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 31 132 - -
Lan4g1631 859 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 153 855 - -
Lan4g1631 859 MobiDBLite consensus disorder prediction 15 34 - -
Lan4g1631 859 Pfam Mechanosensitive ion channel 624 780 IPR006685 GO:0016020|GO:0055085
Lan4g1631 859 MobiDBLite consensus disorder prediction 186 200 - -
Lan4g1631 859 SUPERFAMILY Sm-like ribonucleoproteins 672 731 IPR010920 -
Lan4g1631 859 MobiDBLite consensus disorder prediction 182 203 - -
Lan4g1631 859 Coils Coil 416 436 - -
Lan4g1631 859 Gene3D - 682 731 IPR023408 -
Lan4g1631 859 PIRSF Memb_At2g17000 40 858 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1631 Lan-Chr4 25208979 25217353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1631 49 854 Mechanosensitive Ion Channel Family AT1G78610 56.532 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1631 K22048 - gmx:102665658 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0254 20 1734506 1738149 Lan4g1631 4 25208979 25217353 LSH