Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1604 ATGCCATTTCGAGCTCGAACTCCAACACTTTATCGGTCTCTGCAAACCCTTTTCAATACTCATCACTCTCTCAATTTCTCTTCTTCTCTTCCACTCAAGGTTTCTCGCCACTTGGTTCACGATTGTGACTGTGATGGATTTTTGCCATGGTTGGAGCGCAAAGCTGGTTCCACCATTTCTTCATCACTTTCTATTGGGAAATCTTCATATGGCAGGTCTCTGTTTGCTTCTAAGACGATACAAACTGGGGATTGCATTTTAAAGGTCCCTTACAATGTGCAAATAACTGCGGATAATCTCCCTCCTGAAATCACATCTTTAATCAGTGAGGAAGTCGGATATATCGCCAAACTTGCTATTGTTATTCTAATTGAGAAGAAATTGGGTCAGGGCTCTGACTGGGATCCATATATCAGCTGTCTTCCACAGCCGAGGGACGTTCATAATACGATATTTTGGAATGAAAATGAGCTGGAGATGATTCGCCAAAGCTCAGTTTATCAGGAAACTATTAACCAAAAGTCTCAAATCGAAAAGGACTTTTTGGCAGTCAGGCCTGTTTTTGAATGTCTCCATCAAAGTTTTGGTGTGATTACATACAAGGACTTCATGCATGCATGCACACAAGTTGGCTCTCGAGCATGGGGAAGCACGAAGGGTTTATCACTGATTCCATTTGCAGATTTCTTTAATCATGATGGGGTTTCAGAATCAATTGTAATGAGCGATGATGACAAACAATGCTCAGAAGTTATTGCTGATCGTGACTATGCACCTGGTGAACAGGTTCTGATAAGATATGGAAAGTTTTCAAATGCTACATTGATACTGGACTTTGGTTTTACAGTTCCATACAACACTTATGATCAGGTTCAGTTCCAGTTTGATATACCTAAGCATGACCCTCTGCATGGCATGAAGTTGGAACTCTTACAAAGATATTTTGTGCTTCCAACTGAAGATGTAAAGAGCTTGGAGCATTCTGTGAATTCCTTCACAATCAAGGAGGTGAAGTCGGCTAGAGGAAAAGGGAAGGGTATTCCACAATCACTTCGTGCATTTGCTCGTGTTCTTTCTTGTACCACTCCTCAAGAACTTAACGATTTGGTCAACGAAGCAGCACACGCTGATGGTAGGCTGGCTAGGCGTCCGTTTCAAGATATCAATAGAGAGATACAAGCACACCTGATGCTGTCATCATTATTCGCCCGATTAATCGAGGAGCGCAATGCTGCTATTCTGTCGTTGGATTCTTCCAACTCTCCTTCCTCATGTGAAAGACTTGCTGTTAGAAGATCAATGGCTCGAGATCTCCTAGTCGGTGAGATTCGTGTTCTCAAATCTGCTTCTGCCTGGCTGGAGAACTACTGTGATTTGCATCTATGA 1386 0.4235 MPFRARTPTLYRSLQTLFNTHHSLNFSSSLPLKVSRHLVHDCDCDGFLPWLERKAGSTISSSLSIGKSSYGRSLFASKTIQTGDCILKVPYNVQITADNLPPEITSLISEEVGYIAKLAIVILIEKKLGQGSDWDPYISCLPQPRDVHNTIFWNENELEMIRQSSVYQETINQKSQIEKDFLAVRPVFECLHQSFGVITYKDFMHACTQVGSRAWGSTKGLSLIPFADFFNHDGVSESIVMSDDDKQCSEVIADRDYAPGEQVLIRYGKFSNATLILDFGFTVPYNTYDQVQFQFDIPKHDPLHGMKLELLQRYFVLPTEDVKSLEHSVNSFTIKEVKSARGKGKGIPQSLRAFARVLSCTTPQELNDLVNEAAHADGRLARRPFQDINREIQAHLMLSSLFARLIEERNAAILSLDSSNSPSSCERLAVRRSMARDLLVGEIRVLKSASAWLENYCDLHL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1604 461 PANTHER OS01G0976450 PROTEIN 34 455 - -
Lan4g1604 461 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 34 455 - -
Lan4g1604 461 Pfam SET domain 71 268 IPR001214 GO:0005515
Lan4g1604 461 Gene3D set domain protein methyltransferase, domain 1 41 282 - -
Lan4g1604 461 SUPERFAMILY SET domain 45 286 IPR046341 -
Lan4g1604 461 Pfam Rubisco LSMT substrate-binding 299 446 IPR015353 -
Lan4g1604 461 ProSiteProfiles SET domain profile. 61 268 IPR001214 GO:0005515
Lan4g1604 461 Gene3D - 284 457 IPR036464 -
Lan4g1604 461 CDD SET_RBCMT 70 282 IPR044431 GO:0016279|GO:0018022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan4g1604 SET 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1604 K19199 - gmx:100818002 654.44